RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 DENND4BO75064 1496 aaPredicted RBP10.87□□□□□ -0.67
CNTNAP3B-205ENST00000476961 PLXNC1O60486 1568 aa10.87□□□□□ -0.67
CNTNAP3B-205ENST00000476961 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 SPAG9O60271 1321 aaKnown RBP10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 NEO1Q92859 1461 aa10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 UTP14CQ5TAP6 766 aaKnown RBP10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 TICAM2Q86XR7 235 aa10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 CCDC9Q9Y3X0 531 aaKnown RBP10.86□□□□□ -0.67
CNTNAP3B-205ENST00000476961 ZFYVE16Q7Z3T8 1539 aa10.85□□□□□ -0.67
CNTNAP3B-205ENST00000476961 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
CNTNAP3B-205ENST00000476961 MMP14P50281 582 aa10.85□□□□□ -0.67
CNTNAP3B-205ENST00000476961 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
CNTNAP3B-205ENST00000476961 IRX3P78415 501 aaPredicted RBP10.84□□□□□ -0.67
CNTNAP3B-205ENST00000476961 PZPP20742 1482 aa10.84□□□□□ -0.67
CNTNAP3B-205ENST00000476961 TPM2P07951 284 aa10.84□□□□□ -0.67
CNTNAP3B-205ENST00000476961 GRIPAP1Q4V328 841 aa10.84□□□□□ -0.67
CNTNAP3B-205ENST00000476961 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
CNTNAP3B-205ENST00000476961 SIN3AQ96ST3 1273 aa10.84□□□□□ -0.67
CNTNAP3B-205ENST00000476961 POGZQ7Z3K3 1410 aa10.83□□□□□ -0.68
CNTNAP3B-205ENST00000476961 INO80Q9ULG1 1556 aaPredicted RBP10.83□□□□□ -0.68
CNTNAP3B-205ENST00000476961 TMED8Q6PL24 325 aaPredicted RBP10.83□□□□□ -0.68
CNTNAP3B-205ENST00000476961 ZNF518AQ6AHZ1 1483 aa10.83□□□□□ -0.68
CNTNAP3B-205ENST00000476961 ATP7AQ04656 1500 aa10.83□□□□□ -0.68
CNTNAP3B-205ENST00000476961 DUOX2Q9NRD8 1548 aa10.83□□□□□ -0.68
CNTNAP3B-205ENST00000476961 IGSF3O75054 1194 aa10.82□□□□□ -0.68
CNTNAP3B-205ENST00000476961 KDM5CP41229 1560 aa10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 KCNA4P22459 653 aa10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 PPRC1Q5VV67 1664 aaKnown RBP10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 ERBINQ96RT1 1412 aa10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 CLGNO14967 610 aa10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 FAM193AP78312 1265 aa10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
CNTNAP3B-205ENST00000476961 NUP155O75694 1391 aa10.8□□□□□ -0.68
CNTNAP3B-205ENST00000476961 RAPGEF3O95398 923 aa10.8□□□□□ -0.68
CNTNAP3B-205ENST00000476961 KDM5DQ9BY66 1539 aa10.8□□□□□ -0.68
CNTNAP3B-205ENST00000476961 KIF13AQ9H1H9 1805 aa10.8□□□□□ -0.68
CNTNAP3B-205ENST00000476961 KIDINS220Q9ULH0 1771 aa10.79□□□□□ -0.68
CNTNAP3B-205ENST00000476961 MLH3Q9UHC1 1453 aa10.79□□□□□ -0.68
CNTNAP3B-205ENST00000476961 DMTNQ08495 405 aa10.79□□□□□ -0.68
CNTNAP3B-205ENST00000476961 NFKBIBQ15653 356 aa10.78□□□□□ -0.68
CNTNAP3B-205ENST00000476961 PPP6R1Q9UPN7 881 aa10.78□□□□□ -0.68
CNTNAP3B-205ENST00000476961 HDAC5Q9UQL6 1122 aa10.78□□□□□ -0.68
CNTNAP3B-205ENST00000476961 UNC13BO14795 1591 aa10.78□□□□□ -0.68
CNTNAP3B-205ENST00000476961 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
CNTNAP3B-205ENST00000476961 TEX14Q8IWB6 1497 aa10.78□□□□□ -0.68
CNTNAP3B-205ENST00000476961 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.68
CNTNAP3B-205ENST00000476961 FAM43BQ6ZT52 329 aaPredicted RBP10.77□□□□□ -0.68
CNTNAP3B-205ENST00000476961 HECW2Q9P2P5 1572 aa10.77□□□□□ -0.69
CNTNAP3B-205ENST00000476961 DHX29Q7Z478 1369 aaKnown RBP10.77□□□□□ -0.69
CNTNAP3B-205ENST00000476961 RICTORQ6R327 1708 aa10.77□□□□□ -0.69
CNTNAP3B-205ENST00000476961 MAGI2Q86UL8 1455 aa10.77□□□□□ -0.69
CNTNAP3B-205ENST00000476961 PKD2Q13563 968 aa10.76□□□□□ -0.69
CNTNAP3B-205ENST00000476961 MAP7D2Q96T17 732 aa10.76□□□□□ -0.69
CNTNAP3B-205ENST00000476961 FRMPD1Q5SYB0 1578 aa10.76□□□□□ -0.69
CNTNAP3B-205ENST00000476961 PTMAP06454 111 aaKnown RBP10.76□□□□□ -0.69
CNTNAP3B-205ENST00000476961 PSEN1P49768 467 aa10.76□□□□□ -0.69
CNTNAP3B-205ENST00000476961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.76□□□□□ -0.69
CNTNAP3B-205ENST00000476961 FAM135AQ9P2D6 1515 aa10.76□□□□□ -0.69
CNTNAP3B-205ENST00000476961 ANP32BQ92688 251 aaKnown RBP10.75□□□□□ -0.69
CNTNAP3B-205ENST00000476961 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
CNTNAP3B-205ENST00000476961 TMEM132AQ24JP5 1023 aa10.75□□□□□ -0.69
CNTNAP3B-205ENST00000476961 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
CNTNAP3B-205ENST00000476961 A2MP01023 1474 aa10.74□□□□□ -0.69
CNTNAP3B-205ENST00000476961 ABCA6Q8N139 1617 aa10.74□□□□□ -0.69
CNTNAP3B-205ENST00000476961 MYCNP04198 464 aaPredicted RBP10.74□□□□□ -0.69
CNTNAP3B-205ENST00000476961 ZNF592Q92610 1267 aa10.74□□□□□ -0.69
CNTNAP3B-205ENST00000476961 ZNF622Q969S3 477 aaKnown RBP eCLIP10.74□□□□□ -0.69
CNTNAP3B-205ENST00000476961 IQGAP3Q86VI3 1631 aa10.73□□□□□ -0.69
CNTNAP3B-205ENST00000476961 KIF3BO15066 747 aa10.73□□□□□ -0.69
CNTNAP3B-205ENST00000476961 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
CNTNAP3B-205ENST00000476961 COL17A1Q9UMD9 1497 aaPredicted RBP10.73□□□□□ -0.69
CNTNAP3B-205ENST00000476961 YEATS2Q9ULM3 1422 aa10.73□□□□□ -0.69
CNTNAP3B-205ENST00000476961 KIF20AO95235 890 aa10.72□□□□□ -0.69
CNTNAP3B-205ENST00000476961 DEPDC5O75140 1603 aa10.72□□□□□ -0.69
CNTNAP3B-205ENST00000476961 EIF2AK4Q9P2K8 1649 aaKnown RBP10.72□□□□□ -0.69
CNTNAP3B-205ENST00000476961 ZMYM4Q5VZL5 1548 aa10.72□□□□□ -0.69
CNTNAP3B-205ENST00000476961 DIP2CQ9Y2E4 1556 aa10.72□□□□□ -0.69
CNTNAP3B-205ENST00000476961 CLSTN1O94985 981 aa10.71□□□□□ -0.69
CNTNAP3B-205ENST00000476961 B4GALNT3Q6L9W6 998 aa10.71□□□□□ -0.69
CNTNAP3B-205ENST00000476961 TONSLQ96HA7 1378 aa10.71□□□□□ -0.69
CNTNAP3B-205ENST00000476961 MROH1Q8NDA8 1641 aa10.71□□□□□ -0.7
CNTNAP3B-205ENST00000476961 RPRD2Q5VT52 1461 aaKnown RBP10.71□□□□□ -0.7
CNTNAP3B-205ENST00000476961 PLCD4Q9BRC7 762 aa10.71□□□□□ -0.7
CNTNAP3B-205ENST00000476961 MCCP23508 829 aa10.7□□□□□ -0.7
CNTNAP3B-205ENST00000476961 PPP1R15AO75807 674 aaPredicted RBP10.7□□□□□ -0.7
CNTNAP3B-205ENST00000476961 AXDND1Q5T1B0 1012 aaPredicted RBP10.7□□□□□ -0.7
CNTNAP3B-205ENST00000476961 VWDEQ8N2E2 1590 aa10.7□□□□□ -0.7
CNTNAP3B-205ENST00000476961 PRDM15P57071 1507 aaPredicted RBP10.69□□□□□ -0.7
CNTNAP3B-205ENST00000476961 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
CNTNAP3B-205ENST00000476961 TNNT2P45379 298 aaPredicted RBP10.69□□□□□ -0.7
CNTNAP3B-205ENST00000476961 DNTTIP2Q5QJE6 756 aaKnown RBP10.69□□□□□ -0.7
CNTNAP3B-205ENST00000476961 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
CNTNAP3B-205ENST00000476961 APPP05067 770 aa10.68□□□□□ -0.7
CNTNAP3B-205ENST00000476961 RNF17Q9BXT8 1623 aaKnown RBP10.68□□□□□ -0.7
CNTNAP3B-205ENST00000476961 E9PSI1 815 aa10.68□□□□□ -0.7
CNTNAP3B-205ENST00000476961 TAF3Q5VWG9 929 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms