RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
CPSF4-211ENST00000471455 PRDM15P57071 1507 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-211ENST00000471455 SCAF11Q99590 1463 aaKnown RBP14.33□□□□□ -0.12
CPSF4-211ENST00000471455 CEP152O94986 1710 aa14.33□□□□□ -0.12
CPSF4-211ENST00000471455 FKBP8Q14318 412 aa14.33□□□□□ -0.12
CPSF4-211ENST00000471455 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
CPSF4-211ENST00000471455 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
CPSF4-211ENST00000471455 ARHGAP31Q2M1Z3 1444 aa14.32□□□□□ -0.12
CPSF4-211ENST00000471455 KANK1Q14678 1352 aa14.32□□□□□ -0.12
CPSF4-211ENST00000471455 UBR1Q8IWV7 1749 aa14.32□□□□□ -0.12
CPSF4-211ENST00000471455 LRRC7Q96NW7 1537 aa14.31□□□□□ -0.12
CPSF4-211ENST00000471455 EID1Q9Y6B2 187 aa14.31□□□□□ -0.12
CPSF4-211ENST00000471455 CROCC2H7BZ55 1655 aa14.3□□□□□ -0.12
CPSF4-211ENST00000471455 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-211ENST00000471455 SLIT1O75093 1534 aa14.3□□□□□ -0.12
CPSF4-211ENST00000471455 ARHGAP23Q9P227 1491 aa14.29□□□□□ -0.12
CPSF4-211ENST00000471455 PTPN23Q9H3S7 1636 aa14.28□□□□□ -0.12
CPSF4-211ENST00000471455 ALKQ9UM73 1620 aa14.27□□□□□ -0.12
CPSF4-211ENST00000471455 ABCC5O15440 1437 aa14.27□□□□□ -0.12
CPSF4-211ENST00000471455 TXNDC2Q86VQ3 553 aa14.27□□□□□ -0.13
CPSF4-211ENST00000471455 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
CPSF4-211ENST00000471455 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.13
CPSF4-211ENST00000471455 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
CPSF4-211ENST00000471455 DAPK1P53355 1430 aa14.25□□□□□ -0.13
CPSF4-211ENST00000471455 ANKRD30AQ9BXX3 1397 aa14.25□□□□□ -0.13
CPSF4-211ENST00000471455 RRP7BPQ9NSQ0 103 aa14.25□□□□□ -0.13
CPSF4-211ENST00000471455 KDM5AP29375 1690 aaKnown RBP14.25□□□□□ -0.13
CPSF4-211ENST00000471455 TMEM2Q9UHN6 1383 aa14.24□□□□□ -0.13
CPSF4-211ENST00000471455 LOC105371045A0A1W2PR82 267 aa14.24□□□□□ -0.13
CPSF4-211ENST00000471455 LMTK2Q8IWU2 1503 aa14.24□□□□□ -0.13
CPSF4-211ENST00000471455 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
CPSF4-211ENST00000471455 PIK3C2BO00750 1634 aa14.23□□□□□ -0.13
CPSF4-211ENST00000471455 EFCAB6Q5THR3 1501 aa14.23□□□□□ -0.13
CPSF4-211ENST00000471455 LTKP29376 864 aa14.22□□□□□ -0.13
CPSF4-211ENST00000471455 ADGRB3O60242 1522 aa14.18□□□□□ -0.14
CPSF4-211ENST00000471455 FAM135BQ49AJ0 1406 aa14.17□□□□□ -0.14
CPSF4-211ENST00000471455 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
CPSF4-211ENST00000471455 NKTRP30414 1462 aaKnown RBP14.17□□□□□ -0.14
CPSF4-211ENST00000471455 KCNA6P17658 529 aa14.16□□□□□ -0.14
CPSF4-211ENST00000471455 IDI1Q13907 227 aa14.16□□□□□ -0.14
CPSF4-211ENST00000471455 TMEM94Q12767 1356 aa14.16□□□□□ -0.14
CPSF4-211ENST00000471455 ADGRL2O95490 1459 aa14.16□□□□□ -0.14
CPSF4-211ENST00000471455 RPRD2Q5VT52 1461 aaKnown RBP14.16□□□□□ -0.14
CPSF4-211ENST00000471455 NOS1P29475 1434 aa14.15□□□□□ -0.14
CPSF4-211ENST00000471455 XIRP1Q702N8 1843 aaKnown RBP14.15□□□□□ -0.14
CPSF4-211ENST00000471455 PRR29P0C7W0 189 aa14.15□□□□□ -0.14
CPSF4-211ENST00000471455 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
CPSF4-211ENST00000471455 BCANQ96GW7 911 aa14.14□□□□□ -0.15
CPSF4-211ENST00000471455 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
CPSF4-211ENST00000471455 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
CPSF4-211ENST00000471455 HDGFP51858 240 aaKnown RBP14.13□□□□□ -0.15
CPSF4-211ENST00000471455 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
CPSF4-211ENST00000471455 TET3O43151 1660 aa14.13□□□□□ -0.15
CPSF4-211ENST00000471455 MSH6P52701 1360 aa14.12□□□□□ -0.15
CPSF4-211ENST00000471455 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
CPSF4-211ENST00000471455 ANKRD50Q9ULJ7 1429 aa14.12□□□□□ -0.15
CPSF4-211ENST00000471455 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-211ENST00000471455 SLC26A8Q96RN1 970 aa14.11□□□□□ -0.15
CPSF4-211ENST00000471455 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
CPSF4-211ENST00000471455 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
CPSF4-211ENST00000471455 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
CPSF4-211ENST00000471455 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.07□□□□□ -0.16
CPSF4-211ENST00000471455 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
CPSF4-211ENST00000471455 ZFYVE9O95405 1425 aa14.07□□□□□ -0.16
CPSF4-211ENST00000471455 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
CPSF4-211ENST00000471455 CREBZFQ9NS37 354 aa14.06□□□□□ -0.16
CPSF4-211ENST00000471455 NCOA3Q9Y6Q9 1424 aa14.06□□□□□ -0.16
CPSF4-211ENST00000471455 UNC13BO14795 1591 aa14.05□□□□□ -0.16
CPSF4-211ENST00000471455 DIP2AQ14689 1571 aa14.05□□□□□ -0.16
CPSF4-211ENST00000471455 SLAIN2Q9P270 581 aa14.04□□□□□ -0.16
CPSF4-211ENST00000471455 RGS17Q9UGC6 210 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-211ENST00000471455 JCADQ9P266 1359 aa14.04□□□□□ -0.16
CPSF4-211ENST00000471455 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
CPSF4-211ENST00000471455 TBX22Q9Y458 520 aa14.03□□□□□ -0.16
CPSF4-211ENST00000471455 PHLPP1O60346 1717 aa14.03□□□□□ -0.16
CPSF4-211ENST00000471455 CHD2O14647 1828 aaKnown RBP14.03□□□□□ -0.16
CPSF4-211ENST00000471455 ROCK1Q13464 1354 aa14.02□□□□□ -0.17
CPSF4-211ENST00000471455 PIK3R4Q99570 1358 aa14.02□□□□□ -0.17
CPSF4-211ENST00000471455 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
CPSF4-211ENST00000471455 C14orf37Q86TY3 774 aa14.02□□□□□ -0.17
CPSF4-211ENST00000471455 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
CPSF4-211ENST00000471455 MYO5BQ9ULV0 1848 aa14.01□□□□□ -0.17
CPSF4-211ENST00000471455 CADPS2Q86UW7 1296 aa14□□□□□ -0.17
CPSF4-211ENST00000471455 IQGAP3Q86VI3 1631 aa14□□□□□ -0.17
CPSF4-211ENST00000471455 TRPM2O94759 1503 aa13.99□□□□□ -0.17
CPSF4-211ENST00000471455 E9PCH4 1651 aa13.98□□□□□ -0.17
CPSF4-211ENST00000471455 SPATA31A6Q5VVP1 1343 aa13.98□□□□□ -0.17
CPSF4-211ENST00000471455 ATF3P18847 181 aa13.98□□□□□ -0.17
CPSF4-211ENST00000471455 POTEAQ6S8J7 498 aa13.98□□□□□ -0.17
CPSF4-211ENST00000471455 C19orf44Q9H6X5 657 aa13.97□□□□□ -0.17
CPSF4-211ENST00000471455 ADAMTS13Q76LX8 1427 aa13.97□□□□□ -0.17
CPSF4-211ENST00000471455 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-211ENST00000471455 NUP155O75694 1391 aa13.96□□□□□ -0.18
CPSF4-211ENST00000471455 AHDC1Q5TGY3 1603 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-211ENST00000471455 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
CPSF4-211ENST00000471455 DCCP43146 1447 aa13.95□□□□□ -0.18
CPSF4-211ENST00000471455 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
CPSF4-211ENST00000471455 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
CPSF4-211ENST00000471455 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
CPSF4-211ENST00000471455 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms