RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 TET3O43151 1660 aa13.59□□□□□ -0.23
FN1-216ENST00000469569 GCC2Q8IWJ2 1684 aa13.59□□□□□ -0.23
FN1-216ENST00000469569 IQGAP3Q86VI3 1631 aa13.58□□□□□ -0.24
FN1-216ENST00000469569 HRCP23327 699 aa13.58□□□□□ -0.24
FN1-216ENST00000469569 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
FN1-216ENST00000469569 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
FN1-216ENST00000469569 NOS1P29475 1434 aa13.57□□□□□ -0.24
FN1-216ENST00000469569 HDGFP51858 240 aaKnown RBP13.57□□□□□ -0.24
FN1-216ENST00000469569 AKT1S1Q96B36 256 aa13.57□□□□□ -0.24
FN1-216ENST00000469569 PTPRTO14522 1441 aa13.56□□□□□ -0.24
FN1-216ENST00000469569 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
FN1-216ENST00000469569 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
FN1-216ENST00000469569 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
FN1-216ENST00000469569 IDI1Q13907 227 aa13.54□□□□□ -0.24
FN1-216ENST00000469569 CFAP65Q6ZU64 1925 aaKnown RBP13.53□□□□□ -0.24
FN1-216ENST00000469569 KDM5AP29375 1690 aaKnown RBP13.52□□□□□ -0.25
FN1-216ENST00000469569 NCKAP5LQ9HCH0 1330 aa13.5□□□□□ -0.25
FN1-216ENST00000469569 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.49□□□□□ -0.25
FN1-216ENST00000469569 STRCQ7RTU9 1775 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 TMEM2Q9UHN6 1383 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 E9PCH4 1651 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 TXNDC2Q86VQ3 553 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 SYNMO15061 1565 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 SLIT1O75093 1534 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 MED14O60244 1454 aa13.48□□□□□ -0.25
FN1-216ENST00000469569 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
FN1-216ENST00000469569 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
FN1-216ENST00000469569 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
FN1-216ENST00000469569 UBR1Q8IWV7 1749 aa13.46□□□□□ -0.25
FN1-216ENST00000469569 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
FN1-216ENST00000469569 SCAF11Q99590 1463 aaKnown RBP13.45□□□□□ -0.26
FN1-216ENST00000469569 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
FN1-216ENST00000469569 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
FN1-216ENST00000469569 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
FN1-216ENST00000469569 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
FN1-216ENST00000469569 TRPM2O94759 1503 aa13.43□□□□□ -0.26
FN1-216ENST00000469569 POLR1AO95602 1720 aaPredicted RBP13.42□□□□□ -0.26
FN1-216ENST00000469569 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
FN1-216ENST00000469569 LTKP29376 864 aa13.42□□□□□ -0.26
FN1-216ENST00000469569 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
FN1-216ENST00000469569 RPGRIP1LQ68CZ1 1315 aa13.41□□□□□ -0.26
FN1-216ENST00000469569 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
FN1-216ENST00000469569 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.26
FN1-216ENST00000469569 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
FN1-216ENST00000469569 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
FN1-216ENST00000469569 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
FN1-216ENST00000469569 BCANQ96GW7 911 aa13.39□□□□□ -0.27
FN1-216ENST00000469569 NEURL4Q96JN8 1562 aa13.38□□□□□ -0.27
FN1-216ENST00000469569 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
FN1-216ENST00000469569 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
FN1-216ENST00000469569 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
FN1-216ENST00000469569 ZFYVE9O95405 1425 aa13.38□□□□□ -0.27
FN1-216ENST00000469569 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
FN1-216ENST00000469569 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
FN1-216ENST00000469569 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
FN1-216ENST00000469569 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
FN1-216ENST00000469569 CPS1P31327 1500 aa13.35□□□□□ -0.27
FN1-216ENST00000469569 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
FN1-216ENST00000469569 KIF1BO60333 1816 aa13.34□□□□□ -0.27
FN1-216ENST00000469569 STAC3Q96MF2 364 aa13.34□□□□□ -0.27
FN1-216ENST00000469569 PIK3R4Q99570 1358 aa13.33□□□□□ -0.27
FN1-216ENST00000469569 CLTCL1P53675 1640 aa13.33□□□□□ -0.28
FN1-216ENST00000469569 KCNA6P17658 529 aa13.33□□□□□ -0.28
FN1-216ENST00000469569 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
FN1-216ENST00000469569 LTBP4Q8N2S1 1624 aa13.32□□□□□ -0.28
FN1-216ENST00000469569 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
FN1-216ENST00000469569 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
FN1-216ENST00000469569 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
FN1-216ENST00000469569 SLC26A8Q96RN1 970 aa13.31□□□□□ -0.28
FN1-216ENST00000469569 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
FN1-216ENST00000469569 MYO5BQ9ULV0 1848 aa13.29□□□□□ -0.28
FN1-216ENST00000469569 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
FN1-216ENST00000469569 SPATA31E1Q6ZUB1 1445 aa13.28□□□□□ -0.28
FN1-216ENST00000469569 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
FN1-216ENST00000469569 TOM1O60784 492 aa13.26□□□□□ -0.29
FN1-216ENST00000469569 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
FN1-216ENST00000469569 SETBP1Q9Y6X0 1596 aa13.26□□□□□ -0.29
FN1-216ENST00000469569 NKTRP30414 1462 aaKnown RBP13.25□□□□□ -0.29
FN1-216ENST00000469569 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
FN1-216ENST00000469569 NCOA3Q9Y6Q9 1424 aa13.25□□□□□ -0.29
FN1-216ENST00000469569 PROSER2Q86WR7 435 aaPredicted RBP13.25□□□□□ -0.29
FN1-216ENST00000469569 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
FN1-216ENST00000469569 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
FN1-216ENST00000469569 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
FN1-216ENST00000469569 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
FN1-216ENST00000469569 NWD1Q149M9 1564 aa13.21□□□□□ -0.29
FN1-216ENST00000469569 ILDR1Q86SU0 546 aaPredicted RBP13.21□□□□□ -0.29
FN1-216ENST00000469569 MIER1Q8N108 512 aa13.2□□□□□ -0.3
FN1-216ENST00000469569 PPLO60437 1756 aa13.2□□□□□ -0.3
FN1-216ENST00000469569 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
FN1-216ENST00000469569 MYOM2P54296 1465 aa13.19□□□□□ -0.3
FN1-216ENST00000469569 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
FN1-216ENST00000469569 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
FN1-216ENST00000469569 MSH6P52701 1360 aa13.19□□□□□ -0.3
FN1-216ENST00000469569 ADGRF5Q8IZF2 1346 aa13.18□□□□□ -0.3
FN1-216ENST00000469569 DCAF11Q8TEB1 546 aa13.18□□□□□ -0.3
FN1-216ENST00000469569 C14orf93Q9H972 538 aaKnown RBP13.18□□□□□ -0.3
FN1-216ENST00000469569 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms