RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
LINC01961-201ENST00000449954 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
LINC01961-201ENST00000449954 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
LINC01961-201ENST00000449954 SLIT1O75093 1534 aa13.13□□□□□ -0.31
LINC01961-201ENST00000449954 ARHGAP23Q9P227 1491 aa13.12□□□□□ -0.31
LINC01961-201ENST00000449954 KIF3BO15066 747 aa13.12□□□□□ -0.31
LINC01961-201ENST00000449954 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
LINC01961-201ENST00000449954 CASKIN1Q8WXD9 1431 aa13.12□□□□□ -0.31
LINC01961-201ENST00000449954 FKBP8Q14318 412 aa13.1□□□□□ -0.31
LINC01961-201ENST00000449954 TIAM1Q13009 1591 aa13.1□□□□□ -0.31
LINC01961-201ENST00000449954 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
LINC01961-201ENST00000449954 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
LINC01961-201ENST00000449954 ABCC3O15438 1527 aa13.09□□□□□ -0.31
LINC01961-201ENST00000449954 SHPRHQ149N8 1683 aa13.09□□□□□ -0.31
LINC01961-201ENST00000449954 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.31
LINC01961-201ENST00000449954 MSH6P52701 1360 aa13.08□□□□□ -0.31
LINC01961-201ENST00000449954 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
LINC01961-201ENST00000449954 CCNB3Q8WWL7 1395 aa13.07□□□□□ -0.32
LINC01961-201ENST00000449954 NCOA2Q15596 1464 aa13.07□□□□□ -0.32
LINC01961-201ENST00000449954 MBD5Q9P267 1494 aa13.07□□□□□ -0.32
LINC01961-201ENST00000449954 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
LINC01961-201ENST00000449954 TXNDC2Q86VQ3 553 aa13.06□□□□□ -0.32
LINC01961-201ENST00000449954 PROM2Q8N271 834 aa13.06□□□□□ -0.32
LINC01961-201ENST00000449954 EID1Q9Y6B2 187 aa13.06□□□□□ -0.32
LINC01961-201ENST00000449954 RGS12O14924 1447 aa13.05□□□□□ -0.32
LINC01961-201ENST00000449954 KCNA6P17658 529 aa13.05□□□□□ -0.32
LINC01961-201ENST00000449954 LTKP29376 864 aa13.05□□□□□ -0.32
LINC01961-201ENST00000449954 SLAIN2Q9P270 581 aa13.05□□□□□ -0.32
LINC01961-201ENST00000449954 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
LINC01961-201ENST00000449954 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
LINC01961-201ENST00000449954 PROSER2Q86WR7 435 aaPredicted RBP13.04□□□□□ -0.32
LINC01961-201ENST00000449954 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
LINC01961-201ENST00000449954 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
LINC01961-201ENST00000449954 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.33
LINC01961-201ENST00000449954 ATAD2Q6PL18 1390 aa13.02□□□□□ -0.33
LINC01961-201ENST00000449954 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
LINC01961-201ENST00000449954 KDM5AP29375 1690 aaKnown RBP13.01□□□□□ -0.33
LINC01961-201ENST00000449954 EP400Q96L91 3159 aa13□□□□□ -0.33
LINC01961-201ENST00000449954 TMEM2Q9UHN6 1383 aa13□□□□□ -0.33
LINC01961-201ENST00000449954 AFF2P51816 1311 aa12.99□□□□□ -0.33
LINC01961-201ENST00000449954 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
LINC01961-201ENST00000449954 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
LINC01961-201ENST00000449954 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
LINC01961-201ENST00000449954 NUTM2DQ5VT03 806 aaPredicted RBP12.99□□□□□ -0.33
LINC01961-201ENST00000449954 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
LINC01961-201ENST00000449954 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
LINC01961-201ENST00000449954 TET3O43151 1660 aa12.98□□□□□ -0.33
LINC01961-201ENST00000449954 EIF2AK4Q9P2K8 1649 aaKnown RBP12.98□□□□□ -0.33
LINC01961-201ENST00000449954 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
LINC01961-201ENST00000449954 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
LINC01961-201ENST00000449954 DIP2AQ14689 1571 aa12.96□□□□□ -0.33
LINC01961-201ENST00000449954 RBM33Q96EV2 1170 aaKnown RBP12.96□□□□□ -0.33
LINC01961-201ENST00000449954 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.34
LINC01961-201ENST00000449954 LRP5O75197 1615 aa12.95□□□□□ -0.34
LINC01961-201ENST00000449954 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
LINC01961-201ENST00000449954 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
LINC01961-201ENST00000449954 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
LINC01961-201ENST00000449954 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
LINC01961-201ENST00000449954 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
LINC01961-201ENST00000449954 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
LINC01961-201ENST00000449954 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
LINC01961-201ENST00000449954 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
LINC01961-201ENST00000449954 CEP152O94986 1710 aa12.93□□□□□ -0.34
LINC01961-201ENST00000449954 EVX2Q03828 476 aa12.93□□□□□ -0.34
LINC01961-201ENST00000449954 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
LINC01961-201ENST00000449954 SLC26A8Q96RN1 970 aa12.92□□□□□ -0.34
LINC01961-201ENST00000449954 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
LINC01961-201ENST00000449954 ARHGEF5Q12774 1597 aa12.91□□□□□ -0.34
LINC01961-201ENST00000449954 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
LINC01961-201ENST00000449954 EHBP1L1Q8N3D4 1523 aa12.9□□□□□ -0.34
LINC01961-201ENST00000449954 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
LINC01961-201ENST00000449954 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.35
LINC01961-201ENST00000449954 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
LINC01961-201ENST00000449954 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
LINC01961-201ENST00000449954 C8orf37Q96NL8 207 aa12.88□□□□□ -0.35
LINC01961-201ENST00000449954 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
LINC01961-201ENST00000449954 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
LINC01961-201ENST00000449954 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
LINC01961-201ENST00000449954 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
LINC01961-201ENST00000449954 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.87□□□□□ -0.35
LINC01961-201ENST00000449954 ATF3P18847 181 aa12.86□□□□□ -0.35
LINC01961-201ENST00000449954 ADGRB3O60242 1522 aa12.85□□□□□ -0.35
LINC01961-201ENST00000449954 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
LINC01961-201ENST00000449954 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
LINC01961-201ENST00000449954 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
LINC01961-201ENST00000449954 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
LINC01961-201ENST00000449954 BRINP3Q76B58 766 aa12.84□□□□□ -0.35
LINC01961-201ENST00000449954 DCCP43146 1447 aa12.84□□□□□ -0.35
LINC01961-201ENST00000449954 MIER1Q8N108 512 aa12.83□□□□□ -0.36
LINC01961-201ENST00000449954 PLEKHG1Q9ULL1 1385 aa12.82□□□□□ -0.36
LINC01961-201ENST00000449954 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
LINC01961-201ENST00000449954 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
LINC01961-201ENST00000449954 BCANQ96GW7 911 aa12.82□□□□□ -0.36
LINC01961-201ENST00000449954 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
LINC01961-201ENST00000449954 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
LINC01961-201ENST00000449954 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
LINC01961-201ENST00000449954 BLMP54132 1417 aaPredicted RBP12.8□□□□□ -0.36
LINC01961-201ENST00000449954 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
LINC01961-201ENST00000449954 IDI1Q13907 227 aa12.79□□□□□ -0.36
LINC01961-201ENST00000449954 ATRNO75882 1429 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms