RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
CDC42EP4-202ENST00000439510 PANK3Q9H999 370 aa20.14■□□□□ 0.81
CDC42EP4-202ENST00000439510 MAGI2Q86UL8 1455 aa20.14■□□□□ 0.81
CDC42EP4-202ENST00000439510 PLIN1O60240 522 aa20.12■□□□□ 0.81
CDC42EP4-202ENST00000439510 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
CDC42EP4-202ENST00000439510 MAP3K4Q9Y6R4 1608 aa20.11■□□□□ 0.81
CDC42EP4-202ENST00000439510 TMF1P82094 1093 aa20.11■□□□□ 0.81
CDC42EP4-202ENST00000439510 DAXXQ9UER7 740 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP4-202ENST00000439510 SPAG9O60271 1321 aaKnown RBP20.1■□□□□ 0.81
CDC42EP4-202ENST00000439510 IQGAP1P46940 1657 aa20.09■□□□□ 0.81
CDC42EP4-202ENST00000439510 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
CDC42EP4-202ENST00000439510 DUOX2Q9NRD8 1548 aa20.09■□□□□ 0.81
CDC42EP4-202ENST00000439510 KIF13AQ9H1H9 1805 aa20.08■□□□□ 0.8
CDC42EP4-202ENST00000439510 KDM2BQ8NHM5 1336 aa20.07■□□□□ 0.8
CDC42EP4-202ENST00000439510 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP4-202ENST00000439510 NEFMP07197 916 aa20.05■□□□□ 0.8
CDC42EP4-202ENST00000439510 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
CDC42EP4-202ENST00000439510 GLI2P10070 1586 aa20.05■□□□□ 0.8
CDC42EP4-202ENST00000439510 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
CDC42EP4-202ENST00000439510 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
CDC42EP4-202ENST00000439510 ADAMTS8Q9UP79 889 aa20.04■□□□□ 0.8
CDC42EP4-202ENST00000439510 SYNMO15061 1565 aa20.04■□□□□ 0.8
CDC42EP4-202ENST00000439510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.8
CDC42EP4-202ENST00000439510 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
CDC42EP4-202ENST00000439510 CFAP74Q9C0B2 1584 aa20.04■□□□□ 0.8
CDC42EP4-202ENST00000439510 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
CDC42EP4-202ENST00000439510 EIF5BO60841 1220 aaKnown RBP20.03■□□□□ 0.8
CDC42EP4-202ENST00000439510 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
CDC42EP4-202ENST00000439510 C20orf194Q5TEA3 1177 aa20.02■□□□□ 0.8
CDC42EP4-202ENST00000439510 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.8
CDC42EP4-202ENST00000439510 PPRC1Q5VV67 1664 aaKnown RBP20.01■□□□□ 0.79
CDC42EP4-202ENST00000439510 ATP7AQ04656 1500 aa20.01■□□□□ 0.79
CDC42EP4-202ENST00000439510 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
CDC42EP4-202ENST00000439510 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
CDC42EP4-202ENST00000439510 CENPQQ7L2Z9 268 aaPredicted RBP20■□□□□ 0.79
CDC42EP4-202ENST00000439510 PPP2R1AP30153 589 aa20■□□□□ 0.79
CDC42EP4-202ENST00000439510 SKAP1Q86WV1 359 aa20■□□□□ 0.79
CDC42EP4-202ENST00000439510 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
CDC42EP4-202ENST00000439510 POGZQ7Z3K3 1410 aa19.99■□□□□ 0.79
CDC42EP4-202ENST00000439510 NEO1Q92859 1461 aa19.98■□□□□ 0.79
CDC42EP4-202ENST00000439510 INO80Q9ULG1 1556 aaPredicted RBP19.98■□□□□ 0.79
CDC42EP4-202ENST00000439510 MYOM1P52179 1685 aa19.98■□□□□ 0.79
CDC42EP4-202ENST00000439510 PIK3C2GO75747 1445 aa19.98■□□□□ 0.79
CDC42EP4-202ENST00000439510 AMER1Q5JTC6 1135 aaPredicted RBP19.98■□□□□ 0.79
CDC42EP4-202ENST00000439510 KIDINS220Q9ULH0 1771 aa19.98■□□□□ 0.79
CDC42EP4-202ENST00000439510 CEP152O94986 1710 aa19.98■□□□□ 0.79
CDC42EP4-202ENST00000439510 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
CDC42EP4-202ENST00000439510 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
CDC42EP4-202ENST00000439510 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
CDC42EP4-202ENST00000439510 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
CDC42EP4-202ENST00000439510 NPC1L1Q9UHC9 1359 aa19.95■□□□□ 0.78
CDC42EP4-202ENST00000439510 TRPM2O94759 1503 aa19.95■□□□□ 0.78
CDC42EP4-202ENST00000439510 GOLGA2Q08379 1002 aa19.94■□□□□ 0.78
CDC42EP4-202ENST00000439510 SCAF11Q99590 1463 aaKnown RBP19.94■□□□□ 0.78
CDC42EP4-202ENST00000439510 RTEL1-TNFRSF6BF6WH68 1400 aa19.94■□□□□ 0.78
CDC42EP4-202ENST00000439510 CDCA8Q53HL2 280 aa19.93■□□□□ 0.78
CDC42EP4-202ENST00000439510 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
CDC42EP4-202ENST00000439510 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.93■□□□□ 0.78
CDC42EP4-202ENST00000439510 PLEKHG5O94827 1062 aa19.92■□□□□ 0.78
CDC42EP4-202ENST00000439510 TRMT2AQ8IZ69 625 aaKnown RBP19.92■□□□□ 0.78
CDC42EP4-202ENST00000439510 FAM161AQ3B820 660 aa19.91■□□□□ 0.78
CDC42EP4-202ENST00000439510 HECW2Q9P2P5 1572 aa19.91■□□□□ 0.78
CDC42EP4-202ENST00000439510 KIAA1210Q9ULL0 1709 aa19.91■□□□□ 0.78
CDC42EP4-202ENST00000439510 SLFN5Q08AF3 891 aa19.91■□□□□ 0.78
CDC42EP4-202ENST00000439510 C8orf34Q49A92 452 aa19.91■□□□□ 0.78
CDC42EP4-202ENST00000439510 STAC3Q96MF2 364 aa19.91■□□□□ 0.78
CDC42EP4-202ENST00000439510 KIF3BO15066 747 aa19.9■□□□□ 0.78
CDC42EP4-202ENST00000439510 EIF3AQ14152 1382 aaKnown RBP19.9■□□□□ 0.78
CDC42EP4-202ENST00000439510 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.78
CDC42EP4-202ENST00000439510 KDM5AP29375 1690 aaKnown RBP19.89■□□□□ 0.78
CDC42EP4-202ENST00000439510 IL27Q8NEV9 243 aa19.89■□□□□ 0.77
CDC42EP4-202ENST00000439510 PTPRTO14522 1441 aa19.88■□□□□ 0.77
CDC42EP4-202ENST00000439510 CLTCL1P53675 1640 aa19.88■□□□□ 0.77
CDC42EP4-202ENST00000439510 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
CDC42EP4-202ENST00000439510 FRMPD1Q5SYB0 1578 aa19.88■□□□□ 0.77
CDC42EP4-202ENST00000439510 DEPDC5O75140 1603 aa19.87■□□□□ 0.77
CDC42EP4-202ENST00000439510 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
CDC42EP4-202ENST00000439510 NKTRP30414 1462 aaKnown RBP19.87■□□□□ 0.77
CDC42EP4-202ENST00000439510 NFKBIBQ15653 356 aa19.86■□□□□ 0.77
CDC42EP4-202ENST00000439510 MLH3Q9UHC1 1453 aa19.85■□□□□ 0.77
CDC42EP4-202ENST00000439510 NEURL4Q96JN8 1562 aa19.85■□□□□ 0.77
CDC42EP4-202ENST00000439510 TET3O43151 1660 aa19.84■□□□□ 0.77
CDC42EP4-202ENST00000439510 GSE1Q14687 1217 aa19.83■□□□□ 0.76
CDC42EP4-202ENST00000439510 GGT6Q6P531 493 aa19.82■□□□□ 0.76
CDC42EP4-202ENST00000439510 DIP2CQ9Y2E4 1556 aa19.81■□□□□ 0.76
CDC42EP4-202ENST00000439510 SLC4A3P48751 1232 aa19.81■□□□□ 0.76
CDC42EP4-202ENST00000439510 NGEFQ8N5V2 710 aa19.8■□□□□ 0.76
CDC42EP4-202ENST00000439510 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP4-202ENST00000439510 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP4-202ENST00000439510 E9PSI1 815 aa19.79■□□□□ 0.76
CDC42EP4-202ENST00000439510 CCDC146Q8IYE0 955 aa19.78■□□□□ 0.76
CDC42EP4-202ENST00000439510 VWDEQ8N2E2 1590 aa19.78■□□□□ 0.76
CDC42EP4-202ENST00000439510 APAF1O14727 1248 aa19.77■□□□□ 0.76
CDC42EP4-202ENST00000439510 ERVK-7P63135 1459 aa19.77■□□□□ 0.76
CDC42EP4-202ENST00000439510 CFAP65Q6ZU64 1925 aaKnown RBP19.77■□□□□ 0.75
CDC42EP4-202ENST00000439510 NINLQ9Y2I6 1382 aa19.76■□□□□ 0.75
CDC42EP4-202ENST00000439510 RGS3P49796 1198 aa19.75■□□□□ 0.75
CDC42EP4-202ENST00000439510 MROH1Q8NDA8 1641 aa19.75■□□□□ 0.75
CDC42EP4-202ENST00000439510 MYOM2P54296 1465 aa19.75■□□□□ 0.75
CDC42EP4-202ENST00000439510 BCAR3O75815 825 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms