RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 RRP7BPQ9NSQ0 103 aa10.55□□□□□ -0.72
ERCC8-203ENST00000439176 RNF17Q9BXT8 1623 aaKnown RBP10.55□□□□□ -0.72
ERCC8-203ENST00000439176 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
ERCC8-203ENST00000439176 ZC3H13Q5T200 1668 aaKnown RBP10.54□□□□□ -0.72
ERCC8-203ENST00000439176 TOM1O60784 492 aa10.54□□□□□ -0.72
ERCC8-203ENST00000439176 ABCC3O15438 1527 aa10.53□□□□□ -0.72
ERCC8-203ENST00000439176 KANK1Q14678 1352 aa10.53□□□□□ -0.72
ERCC8-203ENST00000439176 SHANK2Q9UPX8 1470 aa10.53□□□□□ -0.72
ERCC8-203ENST00000439176 ANKRD30AQ9BXX3 1397 aa10.52□□□□□ -0.72
ERCC8-203ENST00000439176 ABCC5O15440 1437 aa10.52□□□□□ -0.73
ERCC8-203ENST00000439176 ERBINQ96RT1 1412 aa10.52□□□□□ -0.73
ERCC8-203ENST00000439176 ZNF579Q8NAF0 562 aaKnown RBP10.52□□□□□ -0.73
ERCC8-203ENST00000439176 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
ERCC8-203ENST00000439176 CPS1P31327 1500 aa10.52□□□□□ -0.73
ERCC8-203ENST00000439176 PTPN23Q9H3S7 1636 aa10.51□□□□□ -0.73
ERCC8-203ENST00000439176 NPHP4O75161 1426 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-203ENST00000439176 FGD6Q6ZV73 1430 aa10.51□□□□□ -0.73
ERCC8-203ENST00000439176 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
ERCC8-203ENST00000439176 SPATA31D1Q6ZQQ2 1576 aa10.51□□□□□ -0.73
ERCC8-203ENST00000439176 DAPK1P53355 1430 aa10.5□□□□□ -0.73
ERCC8-203ENST00000439176 ERVK-7P63135 1459 aa10.5□□□□□ -0.73
ERCC8-203ENST00000439176 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
ERCC8-203ENST00000439176 CHIC2Q9UKJ5 165 aa10.5□□□□□ -0.73
ERCC8-203ENST00000439176 EID1Q9Y6B2 187 aa10.5□□□□□ -0.73
ERCC8-203ENST00000439176 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
ERCC8-203ENST00000439176 MED14O60244 1454 aa10.49□□□□□ -0.73
ERCC8-203ENST00000439176 DEPDC5O75140 1603 aa10.49□□□□□ -0.73
ERCC8-203ENST00000439176 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
ERCC8-203ENST00000439176 FAM50AQ14320 339 aaKnown RBP10.49□□□□□ -0.73
ERCC8-203ENST00000439176 ZRANB1Q9UGI0 708 aa10.49□□□□□ -0.73
ERCC8-203ENST00000439176 NEURL4Q96JN8 1562 aa10.48□□□□□ -0.73
ERCC8-203ENST00000439176 TXNDC2Q86VQ3 553 aa10.48□□□□□ -0.73
ERCC8-203ENST00000439176 PCDH10Q9P2E7 1040 aa10.48□□□□□ -0.73
ERCC8-203ENST00000439176 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-203ENST00000439176 CROCC2H7BZ55 1655 aa10.47□□□□□ -0.73
ERCC8-203ENST00000439176 MROH1Q8NDA8 1641 aa10.47□□□□□ -0.73
ERCC8-203ENST00000439176 CEP152O94986 1710 aa10.47□□□□□ -0.73
ERCC8-203ENST00000439176 CFAP65Q6ZU64 1925 aaKnown RBP10.46□□□□□ -0.73
ERCC8-203ENST00000439176 GALR2O43603 387 aaPredicted RBP10.46□□□□□ -0.73
ERCC8-203ENST00000439176 IQGAP1P46940 1657 aa10.46□□□□□ -0.74
ERCC8-203ENST00000439176 SCAF11Q99590 1463 aaKnown RBP10.45□□□□□ -0.74
ERCC8-203ENST00000439176 VWDEQ8N2E2 1590 aa10.44□□□□□ -0.74
ERCC8-203ENST00000439176 SLC52A1Q9NWF4 448 aa10.44□□□□□ -0.74
ERCC8-203ENST00000439176 SOCS7O14512 581 aa10.43□□□□□ -0.74
ERCC8-203ENST00000439176 LTKP29376 864 aa10.43□□□□□ -0.74
ERCC8-203ENST00000439176 HSPA1LP34931 641 aa10.43□□□□□ -0.74
ERCC8-203ENST00000439176 HDGFP51858 240 aaKnown RBP10.43□□□□□ -0.74
ERCC8-203ENST00000439176 ILDR2Q71H61 639 aa10.43□□□□□ -0.74
ERCC8-203ENST00000439176 UBR1Q8IWV7 1749 aa10.43□□□□□ -0.74
ERCC8-203ENST00000439176 SLIT1O75093 1534 aa10.43□□□□□ -0.74
ERCC8-203ENST00000439176 TMEM2Q9UHN6 1383 aa10.42□□□□□ -0.74
ERCC8-203ENST00000439176 IDI1Q13907 227 aa10.42□□□□□ -0.74
ERCC8-203ENST00000439176 LMTK2Q8IWU2 1503 aa10.42□□□□□ -0.74
ERCC8-203ENST00000439176 ADGRL2O95490 1459 aa10.42□□□□□ -0.74
ERCC8-203ENST00000439176 ARHGAP23Q9P227 1491 aa10.42□□□□□ -0.74
ERCC8-203ENST00000439176 ANKRD50Q9ULJ7 1429 aa10.41□□□□□ -0.74
ERCC8-203ENST00000439176 BCANQ96GW7 911 aa10.41□□□□□ -0.74
ERCC8-203ENST00000439176 EFCAB6Q5THR3 1501 aa10.4□□□□□ -0.74
ERCC8-203ENST00000439176 SYNMO15061 1565 aa10.39□□□□□ -0.75
ERCC8-203ENST00000439176 LRRC7Q96NW7 1537 aa10.39□□□□□ -0.75
ERCC8-203ENST00000439176 RPRD2Q5VT52 1461 aaKnown RBP10.39□□□□□ -0.75
ERCC8-203ENST00000439176 PIK3C2BO00750 1634 aa10.39□□□□□ -0.75
ERCC8-203ENST00000439176 KDM5AP29375 1690 aaKnown RBP10.38□□□□□ -0.75
ERCC8-203ENST00000439176 PPP1R15AO75807 674 aaPredicted RBP10.38□□□□□ -0.75
ERCC8-203ENST00000439176 NOS1P29475 1434 aa10.38□□□□□ -0.75
ERCC8-203ENST00000439176 KCNA6P17658 529 aa10.37□□□□□ -0.75
ERCC8-203ENST00000439176 ROCK1Q13464 1354 aa10.37□□□□□ -0.75
ERCC8-203ENST00000439176 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
ERCC8-203ENST00000439176 SLC26A8Q96RN1 970 aa10.36□□□□□ -0.75
ERCC8-203ENST00000439176 ADGRB3O60242 1522 aa10.35□□□□□ -0.75
ERCC8-203ENST00000439176 CHGAP10645 457 aaKnown RBP10.35□□□□□ -0.75
ERCC8-203ENST00000439176 ITGAEP38570 1179 aa10.35□□□□□ -0.75
ERCC8-203ENST00000439176 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.35□□□□□ -0.75
ERCC8-203ENST00000439176 STRCP1A6NGW2 1772 aa10.34□□□□□ -0.75
ERCC8-203ENST00000439176 TMEM94Q12767 1356 aa10.33□□□□□ -0.76
ERCC8-203ENST00000439176 TET3O43151 1660 aa10.33□□□□□ -0.76
ERCC8-203ENST00000439176 NUP155O75694 1391 aa10.32□□□□□ -0.76
ERCC8-203ENST00000439176 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
ERCC8-203ENST00000439176 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
ERCC8-203ENST00000439176 MSH6P52701 1360 aa10.31□□□□□ -0.76
ERCC8-203ENST00000439176 PLEKHG1Q9ULL1 1385 aa10.31□□□□□ -0.76
ERCC8-203ENST00000439176 ALKQ9UM73 1620 aa10.31□□□□□ -0.76
ERCC8-203ENST00000439176 FAM135BQ49AJ0 1406 aa10.31□□□□□ -0.76
ERCC8-203ENST00000439176 RIMS2Q9UQ26 1411 aa10.31□□□□□ -0.76
ERCC8-203ENST00000439176 NKTRP30414 1462 aaKnown RBP10.3□□□□□ -0.76
ERCC8-203ENST00000439176 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
ERCC8-203ENST00000439176 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
ERCC8-203ENST00000439176 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
ERCC8-203ENST00000439176 TBX22Q9Y458 520 aa10.3□□□□□ -0.76
ERCC8-203ENST00000439176 GCC2Q8IWJ2 1684 aa10.3□□□□□ -0.76
ERCC8-203ENST00000439176 UNC13BO14795 1591 aa10.3□□□□□ -0.76
ERCC8-203ENST00000439176 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
ERCC8-203ENST00000439176 ZFYVE9O95405 1425 aa10.29□□□□□ -0.76
ERCC8-203ENST00000439176 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
ERCC8-203ENST00000439176 PHF12Q96QT6 1004 aa10.28□□□□□ -0.76
ERCC8-203ENST00000439176 TMEM131LA2VDJ0 1609 aa10.27□□□□□ -0.77
ERCC8-203ENST00000439176 IQGAP3Q86VI3 1631 aa10.27□□□□□ -0.77
ERCC8-203ENST00000439176 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
ERCC8-203ENST00000439176 SLAIN2Q9P270 581 aa10.27□□□□□ -0.77
ERCC8-203ENST00000439176 PIK3R4Q99570 1358 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms