RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 PZPP20742 1482 aa13.47□□□□□ -0.25
R3HDM1-208ENST00000438014 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
R3HDM1-208ENST00000438014 RTEL1-TNFRSF6BF6WH68 1400 aa13.46□□□□□ -0.26
R3HDM1-208ENST00000438014 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
R3HDM1-208ENST00000438014 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
R3HDM1-208ENST00000438014 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
R3HDM1-208ENST00000438014 DEPDC5O75140 1603 aa13.44□□□□□ -0.26
R3HDM1-208ENST00000438014 RIOK3O14730 519 aaKnown RBP13.44□□□□□ -0.26
R3HDM1-208ENST00000438014 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
R3HDM1-208ENST00000438014 ADGBQ8N7X0 1667 aa13.43□□□□□ -0.26
R3HDM1-208ENST00000438014 FAM135BQ49AJ0 1406 aa13.42□□□□□ -0.26
R3HDM1-208ENST00000438014 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
R3HDM1-208ENST00000438014 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
R3HDM1-208ENST00000438014 MNX1P50219 401 aaPredicted RBP13.41□□□□□ -0.26
R3HDM1-208ENST00000438014 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
R3HDM1-208ENST00000438014 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
R3HDM1-208ENST00000438014 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
R3HDM1-208ENST00000438014 SYNMO15061 1565 aa13.39□□□□□ -0.27
R3HDM1-208ENST00000438014 IQGAP1P46940 1657 aa13.39□□□□□ -0.27
R3HDM1-208ENST00000438014 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
R3HDM1-208ENST00000438014 MTUS2Q5JR59 1369 aa13.38□□□□□ -0.27
R3HDM1-208ENST00000438014 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
R3HDM1-208ENST00000438014 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
R3HDM1-208ENST00000438014 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
R3HDM1-208ENST00000438014 TSPY4P0CV99 314 aa13.35□□□□□ -0.27
R3HDM1-208ENST00000438014 TSPY10P0CW01 314 aa13.35□□□□□ -0.27
R3HDM1-208ENST00000438014 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
R3HDM1-208ENST00000438014 VGFO15240 615 aaPredicted RBP13.34□□□□□ -0.27
R3HDM1-208ENST00000438014 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
R3HDM1-208ENST00000438014 LTKP29376 864 aa13.34□□□□□ -0.27
R3HDM1-208ENST00000438014 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
R3HDM1-208ENST00000438014 STRCP1A6NGW2 1772 aa13.34□□□□□ -0.27
R3HDM1-208ENST00000438014 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
R3HDM1-208ENST00000438014 STK25O00506 426 aa13.32□□□□□ -0.28
R3HDM1-208ENST00000438014 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
R3HDM1-208ENST00000438014 KCNA6P17658 529 aa13.31□□□□□ -0.28
R3HDM1-208ENST00000438014 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
R3HDM1-208ENST00000438014 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
R3HDM1-208ENST00000438014 TMEM94Q12767 1356 aa13.31□□□□□ -0.28
R3HDM1-208ENST00000438014 JCADQ9P266 1359 aa13.31□□□□□ -0.28
R3HDM1-208ENST00000438014 CCDC141Q6ZP82 1450 aa13.3□□□□□ -0.28
R3HDM1-208ENST00000438014 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
R3HDM1-208ENST00000438014 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
R3HDM1-208ENST00000438014 SLAIN2Q9P270 581 aa13.28□□□□□ -0.28
R3HDM1-208ENST00000438014 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
R3HDM1-208ENST00000438014 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.29
R3HDM1-208ENST00000438014 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
R3HDM1-208ENST00000438014 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.29
R3HDM1-208ENST00000438014 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
R3HDM1-208ENST00000438014 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
R3HDM1-208ENST00000438014 ARHGAP23Q9P227 1491 aa13.26□□□□□ -0.29
R3HDM1-208ENST00000438014 SLIT1O75093 1534 aa13.25□□□□□ -0.29
R3HDM1-208ENST00000438014 NCOA2Q15596 1464 aa13.25□□□□□ -0.29
R3HDM1-208ENST00000438014 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
R3HDM1-208ENST00000438014 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
R3HDM1-208ENST00000438014 RXRBP28702 533 aa13.25□□□□□ -0.29
R3HDM1-208ENST00000438014 SGIP1Q9BQI5 828 aa13.25□□□□□ -0.29
R3HDM1-208ENST00000438014 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
R3HDM1-208ENST00000438014 ABCC3O15438 1527 aa13.24□□□□□ -0.29
R3HDM1-208ENST00000438014 MSH6P52701 1360 aa13.24□□□□□ -0.29
R3HDM1-208ENST00000438014 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
R3HDM1-208ENST00000438014 PYGBP11216 843 aa13.23□□□□□ -0.29
R3HDM1-208ENST00000438014 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
R3HDM1-208ENST00000438014 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
R3HDM1-208ENST00000438014 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
R3HDM1-208ENST00000438014 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
R3HDM1-208ENST00000438014 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
R3HDM1-208ENST00000438014 XIRP1Q702N8 1843 aaKnown RBP13.21□□□□□ -0.29
R3HDM1-208ENST00000438014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.21□□□□□ -0.29
R3HDM1-208ENST00000438014 NBR1Q14596 966 aa13.21□□□□□ -0.29
R3HDM1-208ENST00000438014 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
R3HDM1-208ENST00000438014 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
R3HDM1-208ENST00000438014 EHBP1L1Q8N3D4 1523 aa13.21□□□□□ -0.29
R3HDM1-208ENST00000438014 UBR1Q8IWV7 1749 aa13.21□□□□□ -0.3
R3HDM1-208ENST00000438014 CAMSAP2Q08AD1 1489 aa13.21□□□□□ -0.3
R3HDM1-208ENST00000438014 ARHGAP31Q2M1Z3 1444 aa13.19□□□□□ -0.3
R3HDM1-208ENST00000438014 FGD6Q6ZV73 1430 aa13.19□□□□□ -0.3
R3HDM1-208ENST00000438014 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
R3HDM1-208ENST00000438014 RYDENQ9NUL5 291 aaKnown RBP13.18□□□□□ -0.3
R3HDM1-208ENST00000438014 ARHGEF5Q12774 1597 aa13.17□□□□□ -0.3
R3HDM1-208ENST00000438014 MAP3K1Q13233 1512 aa13.17□□□□□ -0.3
R3HDM1-208ENST00000438014 IDI1Q13907 227 aa13.16□□□□□ -0.3
R3HDM1-208ENST00000438014 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
R3HDM1-208ENST00000438014 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
R3HDM1-208ENST00000438014 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
R3HDM1-208ENST00000438014 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
R3HDM1-208ENST00000438014 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
R3HDM1-208ENST00000438014 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
R3HDM1-208ENST00000438014 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
R3HDM1-208ENST00000438014 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
R3HDM1-208ENST00000438014 LRP6O75581 1613 aa13.13□□□□□ -0.31
R3HDM1-208ENST00000438014 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
R3HDM1-208ENST00000438014 TET3O43151 1660 aa13.12□□□□□ -0.31
R3HDM1-208ENST00000438014 KANK1Q14678 1352 aa13.12□□□□□ -0.31
R3HDM1-208ENST00000438014 NUTM2BA6NNL0 878 aaPredicted RBP13.12□□□□□ -0.31
R3HDM1-208ENST00000438014 NUTM2EB1AL46 878 aaPredicted RBP13.12□□□□□ -0.31
R3HDM1-208ENST00000438014 ATF3P18847 181 aa13.12□□□□□ -0.31
R3HDM1-208ENST00000438014 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
R3HDM1-208ENST00000438014 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
R3HDM1-208ENST00000438014 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms