RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 IQGAP1P46940 1657 aa12.36□□□□□ -0.43
GPC3-203ENST00000406757 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
GPC3-203ENST00000406757 CEP152O94986 1710 aa12.34□□□□□ -0.43
GPC3-203ENST00000406757 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
GPC3-203ENST00000406757 ERBINQ96RT1 1412 aa12.33□□□□□ -0.44
GPC3-203ENST00000406757 STRCP1A6NGW2 1772 aa12.33□□□□□ -0.44
GPC3-203ENST00000406757 LRRC7Q96NW7 1537 aa12.32□□□□□ -0.44
GPC3-203ENST00000406757 NUP155O75694 1391 aa12.32□□□□□ -0.44
GPC3-203ENST00000406757 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
GPC3-203ENST00000406757 HRCP23327 699 aa12.32□□□□□ -0.44
GPC3-203ENST00000406757 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
GPC3-203ENST00000406757 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
GPC3-203ENST00000406757 LTKP29376 864 aa12.31□□□□□ -0.44
GPC3-203ENST00000406757 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
GPC3-203ENST00000406757 SCAF11Q99590 1463 aaKnown RBP12.31□□□□□ -0.44
GPC3-203ENST00000406757 TXNDC2Q86VQ3 553 aa12.3□□□□□ -0.44
GPC3-203ENST00000406757 CCER1Q8TC90 406 aaPredicted RBP12.3□□□□□ -0.44
GPC3-203ENST00000406757 CFAP65Q6ZU64 1925 aaKnown RBP12.3□□□□□ -0.44
GPC3-203ENST00000406757 PRDM15P57071 1507 aaPredicted RBP12.3□□□□□ -0.44
GPC3-203ENST00000406757 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
GPC3-203ENST00000406757 SYNMO15061 1565 aa12.29□□□□□ -0.44
GPC3-203ENST00000406757 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
GPC3-203ENST00000406757 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.44
GPC3-203ENST00000406757 SLIT1O75093 1534 aa12.27□□□□□ -0.44
GPC3-203ENST00000406757 EID1Q9Y6B2 187 aa12.27□□□□□ -0.45
GPC3-203ENST00000406757 UNC13BO14795 1591 aa12.26□□□□□ -0.45
GPC3-203ENST00000406757 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
GPC3-203ENST00000406757 KANK1Q14678 1352 aa12.26□□□□□ -0.45
GPC3-203ENST00000406757 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
GPC3-203ENST00000406757 POLA2Q14181 598 aa12.25□□□□□ -0.45
GPC3-203ENST00000406757 TMEM2Q9UHN6 1383 aa12.24□□□□□ -0.45
GPC3-203ENST00000406757 IDI1Q13907 227 aa12.23□□□□□ -0.45
GPC3-203ENST00000406757 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
GPC3-203ENST00000406757 IQGAP3Q86VI3 1631 aa12.22□□□□□ -0.45
GPC3-203ENST00000406757 EFCAB6Q5THR3 1501 aa12.21□□□□□ -0.45
GPC3-203ENST00000406757 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
GPC3-203ENST00000406757 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.45
GPC3-203ENST00000406757 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
GPC3-203ENST00000406757 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
GPC3-203ENST00000406757 SLC26A8Q96RN1 970 aa12.21□□□□□ -0.45
GPC3-203ENST00000406757 ACIN1Q9UKV3 1341 aaKnown RBP12.2□□□□□ -0.46
GPC3-203ENST00000406757 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
GPC3-203ENST00000406757 NOS1P29475 1434 aa12.19□□□□□ -0.46
GPC3-203ENST00000406757 KCNA6P17658 529 aa12.18□□□□□ -0.46
GPC3-203ENST00000406757 BCANQ96GW7 911 aa12.18□□□□□ -0.46
GPC3-203ENST00000406757 KDM5AP29375 1690 aaKnown RBP12.18□□□□□ -0.46
GPC3-203ENST00000406757 ADGRB3O60242 1522 aa12.17□□□□□ -0.46
GPC3-203ENST00000406757 E9PCH4 1651 aa12.17□□□□□ -0.46
GPC3-203ENST00000406757 TET3O43151 1660 aa12.17□□□□□ -0.46
GPC3-203ENST00000406757 PROSER2Q86WR7 435 aaPredicted RBP12.17□□□□□ -0.46
GPC3-203ENST00000406757 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
GPC3-203ENST00000406757 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
GPC3-203ENST00000406757 SLC52A1Q9NWF4 448 aa12.16□□□□□ -0.46
GPC3-203ENST00000406757 ANKRD30BQ9BXX2 1392 aa12.16□□□□□ -0.46
GPC3-203ENST00000406757 CHRDL2Q6WN34 429 aa12.15□□□□□ -0.46
GPC3-203ENST00000406757 ROBO1Q9Y6N7 1651 aa12.13□□□□□ -0.47
GPC3-203ENST00000406757 NKTRP30414 1462 aaKnown RBP12.12□□□□□ -0.47
GPC3-203ENST00000406757 RPRD2Q5VT52 1461 aaKnown RBP12.12□□□□□ -0.47
GPC3-203ENST00000406757 NWD1Q149M9 1564 aa12.12□□□□□ -0.47
GPC3-203ENST00000406757 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
GPC3-203ENST00000406757 MSH6P52701 1360 aa12.11□□□□□ -0.47
GPC3-203ENST00000406757 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
GPC3-203ENST00000406757 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
GPC3-203ENST00000406757 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
GPC3-203ENST00000406757 PLEKHG1Q9ULL1 1385 aa12.1□□□□□ -0.47
GPC3-203ENST00000406757 POTEAQ6S8J7 498 aa12.1□□□□□ -0.47
GPC3-203ENST00000406757 RGL3Q3MIN7 710 aa12.09□□□□□ -0.47
GPC3-203ENST00000406757 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
GPC3-203ENST00000406757 SLAIN2Q9P270 581 aa12.09□□□□□ -0.47
GPC3-203ENST00000406757 MYO5BQ9ULV0 1848 aa12.09□□□□□ -0.47
GPC3-203ENST00000406757 SPHKAPQ2M3C7 1700 aa12.08□□□□□ -0.47
GPC3-203ENST00000406757 TMEM131LA2VDJ0 1609 aa12.08□□□□□ -0.48
GPC3-203ENST00000406757 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
GPC3-203ENST00000406757 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
GPC3-203ENST00000406757 CCDC144AA2RUR9 1427 aa12.07□□□□□ -0.48
GPC3-203ENST00000406757 CLTCL1P53675 1640 aa12.07□□□□□ -0.48
GPC3-203ENST00000406757 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
GPC3-203ENST00000406757 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.06□□□□□ -0.48
GPC3-203ENST00000406757 TBX22Q9Y458 520 aa12.06□□□□□ -0.48
GPC3-203ENST00000406757 CHD2O14647 1828 aaKnown RBP12.06□□□□□ -0.48
GPC3-203ENST00000406757 TRPM2O94759 1503 aa12.06□□□□□ -0.48
GPC3-203ENST00000406757 PHLPP1O60346 1717 aa12.06□□□□□ -0.48
GPC3-203ENST00000406757 L3MBTL2Q969R5 705 aa12.05□□□□□ -0.48
GPC3-203ENST00000406757 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
GPC3-203ENST00000406757 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
GPC3-203ENST00000406757 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
GPC3-203ENST00000406757 JCADQ9P266 1359 aa12.05□□□□□ -0.48
GPC3-203ENST00000406757 ADAMTS13Q76LX8 1427 aa12.04□□□□□ -0.48
GPC3-203ENST00000406757 TONSLQ96HA7 1378 aa12.04□□□□□ -0.48
GPC3-203ENST00000406757 ZNF326Q5BKZ1 582 aaKnown RBP12.03□□□□□ -0.48
GPC3-203ENST00000406757 NCOA3Q9Y6Q9 1424 aa12.02□□□□□ -0.49
GPC3-203ENST00000406757 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
GPC3-203ENST00000406757 ATF3P18847 181 aa12.01□□□□□ -0.49
GPC3-203ENST00000406757 DCAF11Q8TEB1 546 aa12.01□□□□□ -0.49
GPC3-203ENST00000406757 DIP2AQ14689 1571 aa12.01□□□□□ -0.49
GPC3-203ENST00000406757 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
GPC3-203ENST00000406757 AKT1S1Q96B36 256 aa12□□□□□ -0.49
GPC3-203ENST00000406757 C19orf44Q9H6X5 657 aa12□□□□□ -0.49
GPC3-203ENST00000406757 AMOTL2Q9Y2J4 779 aa12□□□□□ -0.49
GPC3-203ENST00000406757 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms