RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 MYH16Q9H6N6 1097 aa8.39□□□□□ -1.07
TRAPPC13-202ENST00000399438 GOPCQ9HD26 462 aa8.39□□□□□ -1.07
TRAPPC13-202ENST00000399438 IVNS1ABPQ9Y6Y0 642 aa8.39□□□□□ -1.07
TRAPPC13-202ENST00000399438 MTUS2Q5JR59 1369 aa8.38□□□□□ -1.07
TRAPPC13-202ENST00000399438 TPD52L2O43399 206 aaKnown RBP8.38□□□□□ -1.07
TRAPPC13-202ENST00000399438 TXNDC2Q86VQ3 553 aa8.38□□□□□ -1.07
TRAPPC13-202ENST00000399438 FMN1Q68DA7 1419 aa8.38□□□□□ -1.07
TRAPPC13-202ENST00000399438 LRRC9Q6ZRR7 1453 aa8.37□□□□□ -1.07
TRAPPC13-202ENST00000399438 ARHGEF11O15085 1522 aa8.37□□□□□ -1.07
TRAPPC13-202ENST00000399438 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
TRAPPC13-202ENST00000399438 PCF11O94913 1555 aaKnown RBP8.37□□□□□ -1.07
TRAPPC13-202ENST00000399438 MICAL1Q8TDZ2 1067 aa8.37□□□□□ -1.07
TRAPPC13-202ENST00000399438 RIMBP3CA6NJZ7 1639 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 RIMBP3BA6NNM3 1639 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 RIMBP3Q9UFD9 1639 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 GIMAP6Q6P9H5 292 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 ABCA8O94911 1581 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 C8orf37Q96NL8 207 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 DNAJC2Q99543 621 aaKnown RBP8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 RBM27Q9P2N5 1060 aaKnown RBP8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 LAS1LQ9Y4W2 734 aaKnown RBP8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 CASKIN1Q8WXD9 1431 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 SETD5Q9C0A6 1442 aa8.36□□□□□ -1.07
TRAPPC13-202ENST00000399438 E2F4Q16254 413 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 TMTC2Q8N394 836 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 FYCO1Q9BQS8 1478 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 RAPGEF6Q8TEU7 1601 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 RBM26Q5T8P6 1007 aaKnown RBP8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 GPATCH11Q8N954 259 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 PTPRGP23470 1445 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 TIAM1Q13009 1591 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 PTMSP20962 102 aa8.35□□□□□ -1.07
TRAPPC13-202ENST00000399438 CHRM1P11229 460 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC13-202ENST00000399438 SPTY2D1Q68D10 685 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC13-202ENST00000399438 SMYD5Q6GMV2 418 aa8.34□□□□□ -1.07
TRAPPC13-202ENST00000399438 FAM43BQ6ZT52 329 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC13-202ENST00000399438 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
TRAPPC13-202ENST00000399438 HECW1Q76N89 1606 aa8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 SKIV2LQ15477 1246 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 LRRIQ1Q96JM4 1722 aa8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 STAG3Q9UJ98 1225 aa8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 PLB1Q6P1J6 1458 aa8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 ZNF644Q9H582 1327 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 PTPRKQ15262 1439 aa8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 ANO8Q9HCE9 1232 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 MAPKBP1O60336 1514 aa8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
TRAPPC13-202ENST00000399438 UHRF1BP1LA0JNW5 1464 aa8.32□□□□□ -1.08
TRAPPC13-202ENST00000399438 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
TRAPPC13-202ENST00000399438 UACAQ9BZF9 1416 aa8.32□□□□□ -1.08
TRAPPC13-202ENST00000399438 ABCC2Q92887 1545 aa8.32□□□□□ -1.08
TRAPPC13-202ENST00000399438 NUP153P49790 1475 aaKnown RBP8.32□□□□□ -1.08
TRAPPC13-202ENST00000399438 CFAP43Q8NDM7 1665 aa8.32□□□□□ -1.08
TRAPPC13-202ENST00000399438 TCF3P15923 654 aa8.31□□□□□ -1.08
TRAPPC13-202ENST00000399438 TSR1Q2NL82 804 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-202ENST00000399438 MAP3K1Q13233 1512 aa8.31□□□□□ -1.08
TRAPPC13-202ENST00000399438 ADCY10Q96PN6 1610 aa8.31□□□□□ -1.08
TRAPPC13-202ENST00000399438 UBXN4Q92575 508 aa8.3□□□□□ -1.08
TRAPPC13-202ENST00000399438 MCCP23508 829 aa8.3□□□□□ -1.08
TRAPPC13-202ENST00000399438 GORABQ5T7V8 394 aa8.3□□□□□ -1.08
TRAPPC13-202ENST00000399438 CCDC18Q5T9S5 1454 aa8.3□□□□□ -1.08
TRAPPC13-202ENST00000399438 VGFO15240 615 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-202ENST00000399438 STK24Q9Y6E0 443 aa8.29□□□□□ -1.08
TRAPPC13-202ENST00000399438 EPRSP07814 1512 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-202ENST00000399438 TONSLQ96HA7 1378 aa8.29□□□□□ -1.08
TRAPPC13-202ENST00000399438 FOXD4L6Q3SYB3 417 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-202ENST00000399438 FOXD4L3Q6VB84 417 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-202ENST00000399438 NME8Q8N427 588 aa8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 SPINK5Q9NQ38 1064 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 USTQ9Y2C2 406 aa8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 SUPT16HQ9Y5B9 1047 aaKnown RBP8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 APBB1IPQ7Z5R6 666 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 COG6Q9Y2V7 657 aa8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 CDK13Q14004 1512 aaKnown RBP8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 KDM5BQ9UGL1 1544 aa8.28□□□□□ -1.08
TRAPPC13-202ENST00000399438 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.08
TRAPPC13-202ENST00000399438 FGD6Q6ZV73 1430 aa8.27□□□□□ -1.09
TRAPPC13-202ENST00000399438 ATP10BO94823 1461 aa8.27□□□□□ -1.09
TRAPPC13-202ENST00000399438 ZCCHC11Q5TAX3 1644 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-202ENST00000399438 EVI5LQ96CN4 794 aa8.27□□□□□ -1.09
TRAPPC13-202ENST00000399438 CLSPNQ9HAW4 1339 aa8.27□□□□□ -1.09
TRAPPC13-202ENST00000399438 TERF2IPQ9NYB0 399 aa8.27□□□□□ -1.09
TRAPPC13-202ENST00000399438 MCCD1P59942 119 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-202ENST00000399438 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-202ENST00000399438 TBC1D12O60347 775 aa8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 RBM10P98175 930 aaKnown RBP8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 MAGI3Q5TCQ9 1506 aa8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 NCOA2Q15596 1464 aa8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 ZNF16P17020 682 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 FOSBP53539 338 aa8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 GPATCH3Q96I76 525 aa8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 SGIP1Q9BQI5 828 aa8.25□□□□□ -1.09
TRAPPC13-202ENST00000399438 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-202ENST00000399438 PPP1R1BQ9UD71 204 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC13-202ENST00000399438 RALBP1Q15311 655 aa8.24□□□□□ -1.09
TRAPPC13-202ENST00000399438 EHBP1L1Q8N3D4 1523 aa8.23□□□□□ -1.09
TRAPPC13-202ENST00000399438 MAP4K4O95819 1239 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms