RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ESCO1Q5FWF5 840 aa11.51□□□□□ -0.57
ATL3-201ENST00000398868 RAB3GAP2Q9H2M9 1393 aa11.51□□□□□ -0.57
ATL3-201ENST00000398868 CABP2Q9NPB3 220 aa11.51□□□□□ -0.57
ATL3-201ENST00000398868 NOL10Q9BSC4 688 aaKnown RBP11.51□□□□□ -0.57
ATL3-201ENST00000398868 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
ATL3-201ENST00000398868 DDX54Q8TDD1 881 aaKnown RBP11.5□□□□□ -0.57
ATL3-201ENST00000398868 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
ATL3-201ENST00000398868 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
ATL3-201ENST00000398868 TNIKQ9UKE5 1360 aa11.5□□□□□ -0.57
ATL3-201ENST00000398868 FHAD1B1AJZ9 1412 aa11.5□□□□□ -0.57
ATL3-201ENST00000398868 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
ATL3-201ENST00000398868 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
ATL3-201ENST00000398868 PRKCSHP14314 528 aaPredicted RBP11.5□□□□□ -0.57
ATL3-201ENST00000398868 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
ATL3-201ENST00000398868 AKAP17AQ02040 695 aaKnown RBP11.49□□□□□ -0.57
ATL3-201ENST00000398868 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
ATL3-201ENST00000398868 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
ATL3-201ENST00000398868 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
ATL3-201ENST00000398868 ANKRD30AQ9BXX3 1397 aa11.48□□□□□ -0.57
ATL3-201ENST00000398868 ATP2B2Q01814 1243 aa11.48□□□□□ -0.57
ATL3-201ENST00000398868 FAM184AQ8NB25 1140 aa11.48□□□□□ -0.57
ATL3-201ENST00000398868 CEP89Q96ST8 783 aa11.48□□□□□ -0.57
ATL3-201ENST00000398868 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
ATL3-201ENST00000398868 DDX49Q9Y6V7 483 aaKnown RBP11.48□□□□□ -0.57
ATL3-201ENST00000398868 COG6Q9Y2V7 657 aa11.47□□□□□ -0.57
ATL3-201ENST00000398868 KIF16BQ96L93 1317 aa11.47□□□□□ -0.57
ATL3-201ENST00000398868 NFXL1Q6ZNB6 911 aa11.47□□□□□ -0.57
ATL3-201ENST00000398868 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
ATL3-201ENST00000398868 CHMP4BP1P59074 171 aa11.47□□□□□ -0.57
ATL3-201ENST00000398868 SKIDA1Q1XH10 827 aa11.47□□□□□ -0.57
ATL3-201ENST00000398868 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
ATL3-201ENST00000398868 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
ATL3-201ENST00000398868 CCDC88BA6NC98 1476 aa11.46□□□□□ -0.57
ATL3-201ENST00000398868 HMMRO75330 724 aa11.46□□□□□ -0.57
ATL3-201ENST00000398868 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.58
ATL3-201ENST00000398868 RIC3Q7Z5B4 369 aa11.46□□□□□ -0.58
ATL3-201ENST00000398868 WIZO95785 1651 aa11.45□□□□□ -0.58
ATL3-201ENST00000398868 TPM3P06753 285 aa11.45□□□□□ -0.58
ATL3-201ENST00000398868 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
ATL3-201ENST00000398868 PDS5BQ9NTI5 1447 aa11.45□□□□□ -0.58
ATL3-201ENST00000398868 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
ATL3-201ENST00000398868 SF3B2Q13435 895 aaKnown RBP11.45□□□□□ -0.58
ATL3-201ENST00000398868 EIF3AQ14152 1382 aaKnown RBP11.45□□□□□ -0.58
ATL3-201ENST00000398868 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
ATL3-201ENST00000398868 R3HCC1Q9Y3T6 440 aaKnown RBP11.45□□□□□ -0.58
ATL3-201ENST00000398868 ZNF644Q9H582 1327 aaPredicted RBP11.44□□□□□ -0.58
ATL3-201ENST00000398868 NEXNQ0ZGT2 675 aa11.44□□□□□ -0.58
ATL3-201ENST00000398868 CCAR1Q8IX12 1150 aaKnown RBP11.44□□□□□ -0.58
ATL3-201ENST00000398868 ABTB2Q8N961 1025 aa11.44□□□□□ -0.58
ATL3-201ENST00000398868 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
ATL3-201ENST00000398868 RIPK4P57078 832 aa11.44□□□□□ -0.58
ATL3-201ENST00000398868 APAF1O14727 1248 aa11.44□□□□□ -0.58
ATL3-201ENST00000398868 TSPYL4Q9UJ04 414 aa11.43□□□□□ -0.58
ATL3-201ENST00000398868 KAT6BQ8WYB5 2073 aa11.43□□□□□ -0.58
ATL3-201ENST00000398868 FAM161AQ3B820 660 aa11.43□□□□□ -0.58
ATL3-201ENST00000398868 AMOTL1Q8IY63 956 aa11.43□□□□□ -0.58
ATL3-201ENST00000398868 WASHC4Q2M389 1173 aa11.43□□□□□ -0.58
ATL3-201ENST00000398868 PLCD4Q9BRC7 762 aa11.43□□□□□ -0.58
ATL3-201ENST00000398868 RBM5P52756 815 aaKnown RBP eCLIP11.43□□□□□ -0.58
ATL3-201ENST00000398868 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
ATL3-201ENST00000398868 BRPF3Q9ULD4 1205 aa11.42□□□□□ -0.58
ATL3-201ENST00000398868 CCDC43Q96MW1 224 aaKnown RBP11.42□□□□□ -0.58
ATL3-201ENST00000398868 IFIT2P09913 472 aaKnown RBP11.42□□□□□ -0.58
ATL3-201ENST00000398868 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
ATL3-201ENST00000398868 NLRP6P59044 892 aa11.42□□□□□ -0.58
ATL3-201ENST00000398868 DIAPH3Q9NSV4 1193 aa11.42□□□□□ -0.58
ATL3-201ENST00000398868 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
ATL3-201ENST00000398868 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
ATL3-201ENST00000398868 NACADO15069 1562 aa11.42□□□□□ -0.58
ATL3-201ENST00000398868 MAP4K4O95819 1239 aaPredicted RBP11.42□□□□□ -0.58
ATL3-201ENST00000398868 PHF14O94880 888 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 MYL6BP14649 208 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 SYNE3Q6ZMZ3 975 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 ATP2B1P20020 1258 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 DDX11L8A8MPP1 907 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 GOLGA6L19H0YKK7 550 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 HTATSF1O43719 755 aaKnown RBP11.41□□□□□ -0.58
ATL3-201ENST00000398868 TXNDC2Q86VQ3 553 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 PDE4AP27815 886 aa11.41□□□□□ -0.58
ATL3-201ENST00000398868 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
ATL3-201ENST00000398868 PIBF1Q8WXW3 757 aa11.4□□□□□ -0.58
ATL3-201ENST00000398868 GRM1Q13255 1194 aa11.4□□□□□ -0.58
ATL3-201ENST00000398868 ADAMTS2O95450 1211 aa11.4□□□□□ -0.58
ATL3-201ENST00000398868 TEX35Q5T0J7 233 aa11.4□□□□□ -0.58
ATL3-201ENST00000398868 EVC2Q86UK5 1308 aa11.4□□□□□ -0.59
ATL3-201ENST00000398868 FAM43AQ8N2R8 423 aa11.39□□□□□ -0.59
ATL3-201ENST00000398868 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
ATL3-201ENST00000398868 C1orf115Q9H7X2 142 aa11.39□□□□□ -0.59
ATL3-201ENST00000398868 HOMER1Q86YM7 354 aa11.39□□□□□ -0.59
ATL3-201ENST00000398868 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
ATL3-201ENST00000398868 SIL1Q9H173 461 aa11.39□□□□□ -0.59
ATL3-201ENST00000398868 RALBP1Q15311 655 aa11.38□□□□□ -0.59
ATL3-201ENST00000398868 EXOC6Q8TAG9 804 aa11.38□□□□□ -0.59
ATL3-201ENST00000398868 ZFYVE27Q5T4F4 411 aa11.38□□□□□ -0.59
ATL3-201ENST00000398868 CCDC144AA2RUR9 1427 aa11.38□□□□□ -0.59
ATL3-201ENST00000398868 CCER2I3L3R5 266 aa11.38□□□□□ -0.59
ATL3-201ENST00000398868 LMOD3Q0VAK6 560 aa11.38□□□□□ -0.59
ATL3-201ENST00000398868 TTLL5Q6EMB2 1281 aa11.38□□□□□ -0.59
ATL3-201ENST00000398868 SLC26A8Q96RN1 970 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms