RNA–Protein interactions for RNA: ENST00000390427.3

TRAV5-201, Transcript of T cell receptor alpha variable 5, humanhuman

APPRIS P1 BASIC

Gene TRAV5, Length 352 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5-201ENST00000390427 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
TRAV5-201ENST00000390427 CEP170BQ9Y4F5 1589 aaPredicted RBP9.98□□□□□ -0.81
TRAV5-201ENST00000390427 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
TRAV5-201ENST00000390427 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
TRAV5-201ENST00000390427 SAMD9LQ8IVG5 1584 aa9.97□□□□□ -0.81
TRAV5-201ENST00000390427 SUPT6HQ7KZ85 1726 aaKnown RBP9.97□□□□□ -0.81
TRAV5-201ENST00000390427 TIE1P35590 1138 aa9.97□□□□□ -0.81
TRAV5-201ENST00000390427 MED1Q15648 1581 aaPredicted RBP9.97□□□□□ -0.81
TRAV5-201ENST00000390427 PPP1R15AO75807 674 aaPredicted RBP9.96□□□□□ -0.82
TRAV5-201ENST00000390427 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
TRAV5-201ENST00000390427 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.82
TRAV5-201ENST00000390427 SPAG9O60271 1321 aaKnown RBP9.96□□□□□ -0.82
TRAV5-201ENST00000390427 PTPRKQ15262 1439 aa9.96□□□□□ -0.82
TRAV5-201ENST00000390427 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.82
TRAV5-201ENST00000390427 TOM1O60784 492 aa9.95□□□□□ -0.82
TRAV5-201ENST00000390427 FYCO1Q9BQS8 1478 aa9.95□□□□□ -0.82
TRAV5-201ENST00000390427 CPS1P31327 1500 aa9.95□□□□□ -0.82
TRAV5-201ENST00000390427 CLTCQ00610 1675 aaKnown RBP9.95□□□□□ -0.82
TRAV5-201ENST00000390427 CDC42BPAQ5VT25 1732 aa9.95□□□□□ -0.82
TRAV5-201ENST00000390427 PLXNC1O60486 1568 aa9.94□□□□□ -0.82
TRAV5-201ENST00000390427 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
TRAV5-201ENST00000390427 SYCP2Q9BX26 1530 aa9.94□□□□□ -0.82
TRAV5-201ENST00000390427 CASKIN1Q8WXD9 1431 aa9.94□□□□□ -0.82
TRAV5-201ENST00000390427 A2ML1A8K2U0 1454 aa9.93□□□□□ -0.82
TRAV5-201ENST00000390427 A2MP01023 1474 aa9.93□□□□□ -0.82
TRAV5-201ENST00000390427 PLEKHH2Q8IVE3 1493 aa9.93□□□□□ -0.82
TRAV5-201ENST00000390427 KIAA1107Q9UPP5 1409 aa9.93□□□□□ -0.82
TRAV5-201ENST00000390427 HSPA1LP34931 641 aa9.93□□□□□ -0.82
TRAV5-201ENST00000390427 ZNF777Q9ULD5 760 aaPredicted RBP9.93□□□□□ -0.82
TRAV5-201ENST00000390427 INO80Q9ULG1 1556 aaPredicted RBP9.92□□□□□ -0.82
TRAV5-201ENST00000390427 ATN1P54259 1190 aaPredicted RBP9.92□□□□□ -0.82
TRAV5-201ENST00000390427 ANP32EQ9BTT0 268 aa9.92□□□□□ -0.82
TRAV5-201ENST00000390427 TTLL13PA6NNM8 815 aa9.91□□□□□ -0.82
TRAV5-201ENST00000390427 PIP4K2BP78356 416 aa9.91□□□□□ -0.82
TRAV5-201ENST00000390427 GGT6Q6P531 493 aa9.91□□□□□ -0.82
TRAV5-201ENST00000390427 PCDHB8Q9UN66 801 aa9.91□□□□□ -0.82
TRAV5-201ENST00000390427 DNMT1P26358 1616 aaKnown RBP9.9□□□□□ -0.82
TRAV5-201ENST00000390427 HNRNPMP52272 730 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRAV5-201ENST00000390427 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
TRAV5-201ENST00000390427 GPATCH8Q9UKJ3 1502 aaKnown RBP9.9□□□□□ -0.82
TRAV5-201ENST00000390427 SHANK2Q9UPX8 1470 aa9.9□□□□□ -0.83
TRAV5-201ENST00000390427 POLR1AO95602 1720 aaPredicted RBP9.9□□□□□ -0.83
TRAV5-201ENST00000390427 ADGBQ8N7X0 1667 aa9.89□□□□□ -0.83
TRAV5-201ENST00000390427 ANP32CO43423 234 aa9.88□□□□□ -0.83
TRAV5-201ENST00000390427 CFDP1Q9UEE9 299 aaPredicted RBP9.88□□□□□ -0.83
TRAV5-201ENST00000390427 NEURL4Q96JN8 1562 aa9.88□□□□□ -0.83
TRAV5-201ENST00000390427 FAM135AQ9P2D6 1515 aa9.87□□□□□ -0.83
TRAV5-201ENST00000390427 NEFLP07196 543 aa9.87□□□□□ -0.83
TRAV5-201ENST00000390427 ITGAEP38570 1179 aa9.87□□□□□ -0.83
TRAV5-201ENST00000390427 DDX10Q13206 875 aaKnown RBP9.87□□□□□ -0.83
TRAV5-201ENST00000390427 TNRQ92752 1358 aa9.87□□□□□ -0.83
TRAV5-201ENST00000390427 HFM1A2PYH4 1435 aa9.86□□□□□ -0.83
TRAV5-201ENST00000390427 ANKLE2Q86XL3 938 aa9.86□□□□□ -0.83
TRAV5-201ENST00000390427 PZPP20742 1482 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 RTEL1-TNFRSF6BF6WH68 1400 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 FGD6Q6ZV73 1430 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 C7P10643 843 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 FAM50AQ14320 339 aaKnown RBP9.85□□□□□ -0.83
TRAV5-201ENST00000390427 ERICH6BQ5W0A0 696 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 SLC39A7Q92504 469 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 SIN3AQ96ST3 1273 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 NLRP1Q9C000 1473 aa9.85□□□□□ -0.83
TRAV5-201ENST00000390427 VWDEQ8N2E2 1590 aa9.84□□□□□ -0.83
TRAV5-201ENST00000390427 KDM5DQ9BY66 1539 aa9.84□□□□□ -0.83
TRAV5-201ENST00000390427 THEMISQ8N1K5 641 aaPredicted RBP9.84□□□□□ -0.83
TRAV5-201ENST00000390427 TMEM106CQ9BVX2 250 aa9.84□□□□□ -0.83
TRAV5-201ENST00000390427 DEPDC5O75140 1603 aa9.84□□□□□ -0.83
TRAV5-201ENST00000390427 DHX29Q7Z478 1369 aaKnown RBP9.84□□□□□ -0.83
TRAV5-201ENST00000390427 MED14O60244 1454 aa9.84□□□□□ -0.83
TRAV5-201ENST00000390427 NPHP4O75161 1426 aaPredicted RBP9.83□□□□□ -0.84
TRAV5-201ENST00000390427 LHX8Q68G74 356 aa9.83□□□□□ -0.84
TRAV5-201ENST00000390427 TRIM35Q9UPQ4 493 aa9.82□□□□□ -0.84
TRAV5-201ENST00000390427 TONSLQ96HA7 1378 aa9.82□□□□□ -0.84
TRAV5-201ENST00000390427 UGGT1Q9NYU2 1555 aa9.82□□□□□ -0.84
TRAV5-201ENST00000390427 RNF17Q9BXT8 1623 aaKnown RBP9.82□□□□□ -0.84
TRAV5-201ENST00000390427 ALKQ9UM73 1620 aa9.82□□□□□ -0.84
TRAV5-201ENST00000390427 SYNMO15061 1565 aa9.81□□□□□ -0.84
TRAV5-201ENST00000390427 MBD5Q9P267 1494 aa9.81□□□□□ -0.84
TRAV5-201ENST00000390427 MTUS2Q5JR59 1369 aa9.81□□□□□ -0.84
TRAV5-201ENST00000390427 FBXO31Q5XUX0 539 aaPredicted RBP9.81□□□□□ -0.84
TRAV5-201ENST00000390427 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
TRAV5-201ENST00000390427 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
TRAV5-201ENST00000390427 MIA2Q96PC5 1412 aa9.81□□□□□ -0.84
TRAV5-201ENST00000390427 WASHC2CQ9Y4E1 1318 aa9.81□□□□□ -0.84
TRAV5-201ENST00000390427 IQGAP1P46940 1657 aa9.8□□□□□ -0.84
TRAV5-201ENST00000390427 POTEFA5A3E0 1075 aa9.8□□□□□ -0.84
TRAV5-201ENST00000390427 POTEB2H3BUK9 544 aa9.8□□□□□ -0.84
TRAV5-201ENST00000390427 KIF3BO15066 747 aa9.8□□□□□ -0.84
TRAV5-201ENST00000390427 PSEN1P49768 467 aa9.8□□□□□ -0.84
TRAV5-201ENST00000390427 IER5LQ5T953 404 aa9.8□□□□□ -0.84
TRAV5-201ENST00000390427 PTPN23Q9H3S7 1636 aa9.8□□□□□ -0.84
TRAV5-201ENST00000390427 LRRC7Q96NW7 1537 aa9.79□□□□□ -0.84
TRAV5-201ENST00000390427 PDAP1Q13442 181 aaKnown RBP9.79□□□□□ -0.84
TRAV5-201ENST00000390427 MYOM3Q5VTT5 1437 aa9.79□□□□□ -0.84
TRAV5-201ENST00000390427 RSPH4AQ5TD94 716 aa9.78□□□□□ -0.84
TRAV5-201ENST00000390427 NAIPQ13075 1403 aa9.78□□□□□ -0.84
TRAV5-201ENST00000390427 CCDC141Q6ZP82 1450 aa9.78□□□□□ -0.84
TRAV5-201ENST00000390427 EHBP1L1Q8N3D4 1523 aa9.77□□□□□ -0.84
TRAV5-201ENST00000390427 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
TRAV5-201ENST00000390427 ZNF644Q9H582 1327 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms