RNA–Protein interactions for RNA: ENST00000368450.5

SHC1-204, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-204ENST00000368450 TNNQ9UQP3 1299 aa19.01■□□□□ 0.63
SHC1-204ENST00000368450 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
SHC1-204ENST00000368450 RRP7AQ9Y3A4 280 aaKnown RBP19■□□□□ 0.63
SHC1-204ENST00000368450 ARHGEF12Q9NZN5 1544 aa19■□□□□ 0.63
SHC1-204ENST00000368450 E9PCH4 1651 aa19■□□□□ 0.63
SHC1-204ENST00000368450 ARID3AQ99856 593 aa19■□□□□ 0.63
SHC1-204ENST00000368450 INSRP06213 1382 aa18.99■□□□□ 0.63
SHC1-204ENST00000368450 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
SHC1-204ENST00000368450 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
SHC1-204ENST00000368450 ZNF608Q9ULD9 1512 aaPredicted RBP18.99■□□□□ 0.63
SHC1-204ENST00000368450 RBM10P98175 930 aaKnown RBP18.99■□□□□ 0.63
SHC1-204ENST00000368450 DDX11L8A8MPP1 907 aa18.98■□□□□ 0.63
SHC1-204ENST00000368450 PRAG1Q86YV5 1406 aa18.98■□□□□ 0.63
SHC1-204ENST00000368450 KIAA1211Q6ZU35 1233 aa18.97■□□□□ 0.63
SHC1-204ENST00000368450 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
SHC1-204ENST00000368450 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
SHC1-204ENST00000368450 COL17A1Q9UMD9 1497 aaPredicted RBP18.96■□□□□ 0.63
SHC1-204ENST00000368450 KIF21AQ7Z4S6 1674 aa18.96■□□□□ 0.63
SHC1-204ENST00000368450 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
SHC1-204ENST00000368450 TRMT2AQ8IZ69 625 aaKnown RBP18.96■□□□□ 0.63
SHC1-204ENST00000368450 AMER1Q5JTC6 1135 aaPredicted RBP18.95■□□□□ 0.62
SHC1-204ENST00000368450 TNNT2P45379 298 aaPredicted RBP18.95■□□□□ 0.62
SHC1-204ENST00000368450 RLBP1P12271 317 aa18.94■□□□□ 0.62
SHC1-204ENST00000368450 GAS2L3Q86XJ1 694 aa18.94■□□□□ 0.62
SHC1-204ENST00000368450 ANP32BQ92688 251 aaKnown RBP18.94■□□□□ 0.62
SHC1-204ENST00000368450 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
SHC1-204ENST00000368450 TPM2P07951 284 aa18.93■□□□□ 0.62
SHC1-204ENST00000368450 NUP153P49790 1475 aaKnown RBP18.93■□□□□ 0.62
SHC1-204ENST00000368450 HSP90AB1P08238 724 aaKnown RBP18.93■□□□□ 0.62
SHC1-204ENST00000368450 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
SHC1-204ENST00000368450 PLEKHD1A6NEE1 506 aa18.92■□□□□ 0.62
SHC1-204ENST00000368450 PDCL3Q9H2J4 239 aa18.92■□□□□ 0.62
SHC1-204ENST00000368450 TROQ12816 1431 aaPredicted RBP18.92■□□□□ 0.62
SHC1-204ENST00000368450 NLRP1Q9C000 1473 aa18.91■□□□□ 0.62
SHC1-204ENST00000368450 FAM13BQ9NYF5 915 aa18.91■□□□□ 0.62
SHC1-204ENST00000368450 MSNP26038 577 aaKnown RBP18.9■□□□□ 0.62
SHC1-204ENST00000368450 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
SHC1-204ENST00000368450 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.62
SHC1-204ENST00000368450 PODXL2Q9NZ53 605 aa18.89■□□□□ 0.62
SHC1-204ENST00000368450 TNPO1Q92973 898 aaKnown RBP18.89■□□□□ 0.61
SHC1-204ENST00000368450 GBP4Q96PP9 640 aa18.89■□□□□ 0.61
SHC1-204ENST00000368450 MAGI2Q86UL8 1455 aa18.88■□□□□ 0.61
SHC1-204ENST00000368450 ADGRL2O95490 1459 aa18.88■□□□□ 0.61
SHC1-204ENST00000368450 RARSP54136 660 aaKnown RBP18.87■□□□□ 0.61
SHC1-204ENST00000368450 NCLP19338 710 aaKnown RBP18.87■□□□□ 0.61
SHC1-204ENST00000368450 CDCA8Q53HL2 280 aa18.87■□□□□ 0.61
SHC1-204ENST00000368450 FBLN2P98095 1184 aa18.86■□□□□ 0.61
SHC1-204ENST00000368450 ADGBQ8N7X0 1667 aa18.86■□□□□ 0.61
SHC1-204ENST00000368450 R3HCC1Q9Y3T6 440 aaKnown RBP18.85■□□□□ 0.61
SHC1-204ENST00000368450 NASPP49321 788 aaPredicted RBP18.85■□□□□ 0.61
SHC1-204ENST00000368450 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
SHC1-204ENST00000368450 KDM5DQ9BY66 1539 aa18.83■□□□□ 0.61
SHC1-204ENST00000368450 GPRASP1Q5JY77 1395 aa18.82■□□□□ 0.6
SHC1-204ENST00000368450 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
SHC1-204ENST00000368450 A2MP01023 1474 aa18.82■□□□□ 0.6
SHC1-204ENST00000368450 TRPM1Q7Z4N2 1603 aa18.81■□□□□ 0.6
SHC1-204ENST00000368450 ZSCAN30Q86W11 494 aa18.81■□□□□ 0.6
SHC1-204ENST00000368450 DDX49Q9Y6V7 483 aaKnown RBP18.81■□□□□ 0.6
SHC1-204ENST00000368450 ZBTB7CA1YPR0 619 aa18.81■□□□□ 0.6
SHC1-204ENST00000368450 VIRMAQ69YN4 1812 aaKnown RBP18.8■□□□□ 0.6
SHC1-204ENST00000368450 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
SHC1-204ENST00000368450 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
SHC1-204ENST00000368450 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
SHC1-204ENST00000368450 GOLGA6L22H0YM25 854 aa18.8■□□□□ 0.6
SHC1-204ENST00000368450 CCDC173Q0VFZ6 552 aa18.8■□□□□ 0.6
SHC1-204ENST00000368450 SKOR2Q2VWA4 1001 aaPredicted RBP18.8■□□□□ 0.6
SHC1-204ENST00000368450 ITPRIPQ8IWB1 547 aa18.8■□□□□ 0.6
SHC1-204ENST00000368450 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
SHC1-204ENST00000368450 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
SHC1-204ENST00000368450 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
SHC1-204ENST00000368450 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
SHC1-204ENST00000368450 MVPQ14764 893 aaKnown RBP18.77■□□□□ 0.6
SHC1-204ENST00000368450 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.77■□□□□ 0.6
SHC1-204ENST00000368450 RAPGEF6Q8TEU7 1601 aa18.77■□□□□ 0.6
SHC1-204ENST00000368450 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
SHC1-204ENST00000368450 LNPKQ9C0E8 428 aa18.77■□□□□ 0.59
SHC1-204ENST00000368450 ZKSCAN2Q63HK3 967 aa18.76■□□□□ 0.59
SHC1-204ENST00000368450 FAM135AQ9P2D6 1515 aa18.76■□□□□ 0.59
SHC1-204ENST00000368450 PIK3C2GO75747 1445 aa18.76■□□□□ 0.59
SHC1-204ENST00000368450 OFD1O75665 1012 aa18.75■□□□□ 0.59
SHC1-204ENST00000368450 ITSN2Q9NZM3 1697 aa18.75■□□□□ 0.59
SHC1-204ENST00000368450 SSFA2P28290 1259 aa18.75■□□□□ 0.59
SHC1-204ENST00000368450 XPCQ01831 940 aaPredicted RBP18.75■□□□□ 0.59
SHC1-204ENST00000368450 AAMPQ13685 434 aa18.75■□□□□ 0.59
SHC1-204ENST00000368450 SMC4Q9NTJ3 1288 aa18.75■□□□□ 0.59
SHC1-204ENST00000368450 ASXL1Q8IXJ9 1541 aa18.74■□□□□ 0.59
SHC1-204ENST00000368450 RIPK4P57078 832 aa18.74■□□□□ 0.59
SHC1-204ENST00000368450 DISP1Q96F81 1524 aa18.73■□□□□ 0.59
SHC1-204ENST00000368450 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
SHC1-204ENST00000368450 NGEFQ8N5V2 710 aa18.73■□□□□ 0.59
SHC1-204ENST00000368450 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
SHC1-204ENST00000368450 CALD1Q05682 793 aaKnown RBP18.73■□□□□ 0.59
SHC1-204ENST00000368450 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
SHC1-204ENST00000368450 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
SHC1-204ENST00000368450 PRDM10Q9NQV6 1147 aa18.72■□□□□ 0.59
SHC1-204ENST00000368450 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
SHC1-204ENST00000368450 TSR2Q969E8 191 aaKnown RBP18.72■□□□□ 0.59
SHC1-204ENST00000368450 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
SHC1-204ENST00000368450 UQCRHLA0A096LP55 91 aa18.71■□□□□ 0.59
SHC1-204ENST00000368450 UQCRHP07919 91 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms