RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 SKAP1Q86WV1 359 aa18.36■□□□□ 0.53
SIRPA-202ENST00000358771 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
SIRPA-202ENST00000358771 PRAG1Q86YV5 1406 aa18.35■□□□□ 0.53
SIRPA-202ENST00000358771 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
SIRPA-202ENST00000358771 PDE4AP27815 886 aa18.34■□□□□ 0.53
SIRPA-202ENST00000358771 ARXQ96QS3 562 aa18.34■□□□□ 0.53
SIRPA-202ENST00000358771 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
SIRPA-202ENST00000358771 ABCC10Q5T3U5 1492 aa18.32■□□□□ 0.52
SIRPA-202ENST00000358771 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
SIRPA-202ENST00000358771 E9PSI1 815 aa18.32■□□□□ 0.52
SIRPA-202ENST00000358771 MBD5Q9P267 1494 aa18.31■□□□□ 0.52
SIRPA-202ENST00000358771 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
SIRPA-202ENST00000358771 IPO9Q96P70 1041 aaKnown RBP18.31■□□□□ 0.52
SIRPA-202ENST00000358771 SHANK2Q9UPX8 1470 aa18.3■□□□□ 0.52
SIRPA-202ENST00000358771 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
SIRPA-202ENST00000358771 BCAR3O75815 825 aa18.3■□□□□ 0.52
SIRPA-202ENST00000358771 DDRGK1Q96HY6 314 aa18.3■□□□□ 0.52
SIRPA-202ENST00000358771 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
SIRPA-202ENST00000358771 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
SIRPA-202ENST00000358771 PRAM1Q96QH2 718 aa18.29■□□□□ 0.52
SIRPA-202ENST00000358771 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
SIRPA-202ENST00000358771 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
SIRPA-202ENST00000358771 MYH16Q9H6N6 1097 aa18.28■□□□□ 0.52
SIRPA-202ENST00000358771 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
SIRPA-202ENST00000358771 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
SIRPA-202ENST00000358771 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
SIRPA-202ENST00000358771 PANK1Q8TE04 598 aa18.27■□□□□ 0.52
SIRPA-202ENST00000358771 ABCA8O94911 1581 aa18.27■□□□□ 0.52
SIRPA-202ENST00000358771 LMOD2Q6P5Q4 547 aa18.26■□□□□ 0.51
SIRPA-202ENST00000358771 ASXL2Q76L83 1435 aa18.26■□□□□ 0.51
SIRPA-202ENST00000358771 IDI1Q13907 227 aa18.25■□□□□ 0.51
SIRPA-202ENST00000358771 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
SIRPA-202ENST00000358771 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
SIRPA-202ENST00000358771 A2MP01023 1474 aa18.24■□□□□ 0.51
SIRPA-202ENST00000358771 HDGFP51858 240 aaKnown RBP18.24■□□□□ 0.51
SIRPA-202ENST00000358771 DUOX2Q9NRD8 1548 aa18.24■□□□□ 0.51
SIRPA-202ENST00000358771 RUNDC1Q96C34 613 aa18.24■□□□□ 0.51
SIRPA-202ENST00000358771 MSH5O43196 834 aa18.23■□□□□ 0.51
SIRPA-202ENST00000358771 NOS1P29475 1434 aa18.22■□□□□ 0.51
SIRPA-202ENST00000358771 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
SIRPA-202ENST00000358771 HMOX1P09601 288 aa18.22■□□□□ 0.51
SIRPA-202ENST00000358771 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
SIRPA-202ENST00000358771 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
SIRPA-202ENST00000358771 PNNQ9H307 717 aaKnown RBP18.22■□□□□ 0.51
SIRPA-202ENST00000358771 UHRF1BP1Q6BDS2 1440 aa18.22■□□□□ 0.51
SIRPA-202ENST00000358771 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.51
SIRPA-202ENST00000358771 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
SIRPA-202ENST00000358771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.2■□□□□ 0.5
SIRPA-202ENST00000358771 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
SIRPA-202ENST00000358771 CABP1Q9NZU7 370 aa18.2■□□□□ 0.5
SIRPA-202ENST00000358771 RIPK4P57078 832 aa18.19■□□□□ 0.5
SIRPA-202ENST00000358771 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
SIRPA-202ENST00000358771 SCAF11Q99590 1463 aaKnown RBP18.19■□□□□ 0.5
SIRPA-202ENST00000358771 WDR7Q9Y4E6 1490 aa18.19■□□□□ 0.5
SIRPA-202ENST00000358771 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
SIRPA-202ENST00000358771 PARD3Q8TEW0 1356 aa18.18■□□□□ 0.5
SIRPA-202ENST00000358771 APBB1O00213 710 aa18.18■□□□□ 0.5
SIRPA-202ENST00000358771 ARHGEF12Q9NZN5 1544 aa18.18■□□□□ 0.5
SIRPA-202ENST00000358771 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
SIRPA-202ENST00000358771 TSR2Q969E8 191 aaKnown RBP18.18■□□□□ 0.5
SIRPA-202ENST00000358771 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
SIRPA-202ENST00000358771 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
SIRPA-202ENST00000358771 BECN1Q14457 450 aa18.17■□□□□ 0.5
SIRPA-202ENST00000358771 SLC52A1Q9NWF4 448 aa18.17■□□□□ 0.5
SIRPA-202ENST00000358771 WAPLQ7Z5K2 1190 aa18.16■□□□□ 0.5
SIRPA-202ENST00000358771 MS4A1P11836 297 aa18.16■□□□□ 0.5
SIRPA-202ENST00000358771 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
SIRPA-202ENST00000358771 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
SIRPA-202ENST00000358771 SLFN5Q08AF3 891 aa18.15■□□□□ 0.5
SIRPA-202ENST00000358771 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
SIRPA-202ENST00000358771 TTC37Q6PGP7 1564 aa18.14■□□□□ 0.49
SIRPA-202ENST00000358771 CARD14Q9BXL6 1004 aa18.14■□□□□ 0.49
SIRPA-202ENST00000358771 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
SIRPA-202ENST00000358771 ADGBQ8N7X0 1667 aa18.14■□□□□ 0.49
SIRPA-202ENST00000358771 DUSP27Q5VZP5 1158 aa18.14■□□□□ 0.49
SIRPA-202ENST00000358771 WWC1Q8IX03 1113 aa18.13■□□□□ 0.49
SIRPA-202ENST00000358771 FBLN1P23142 703 aa18.13■□□□□ 0.49
SIRPA-202ENST00000358771 NGDNQ8NEJ9 315 aaKnown RBP18.13■□□□□ 0.49
SIRPA-202ENST00000358771 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
SIRPA-202ENST00000358771 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
SIRPA-202ENST00000358771 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
SIRPA-202ENST00000358771 COG3Q96JB2 828 aa18.12■□□□□ 0.49
SIRPA-202ENST00000358771 ZKSCAN2Q63HK3 967 aa18.12■□□□□ 0.49
SIRPA-202ENST00000358771 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
SIRPA-202ENST00000358771 PMFBP1Q8TBY8 1022 aa18.11■□□□□ 0.49
SIRPA-202ENST00000358771 CDC42BPAQ5VT25 1732 aa18.11■□□□□ 0.49
SIRPA-202ENST00000358771 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
SIRPA-202ENST00000358771 EXOSC9Q06265 439 aaKnown RBP18.09■□□□□ 0.49
SIRPA-202ENST00000358771 EID1Q9Y6B2 187 aa18.09■□□□□ 0.49
SIRPA-202ENST00000358771 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
SIRPA-202ENST00000358771 CHD1O14646 1710 aa18.08■□□□□ 0.49
SIRPA-202ENST00000358771 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.49
SIRPA-202ENST00000358771 PRKAR2BP31323 418 aa18.08■□□□□ 0.48
SIRPA-202ENST00000358771 ARHGEF5Q12774 1597 aa18.07■□□□□ 0.48
SIRPA-202ENST00000358771 COL17A1Q9UMD9 1497 aaPredicted RBP18.07■□□□□ 0.48
SIRPA-202ENST00000358771 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
SIRPA-202ENST00000358771 RTF1Q92541 710 aaKnown RBP18.07■□□□□ 0.48
SIRPA-202ENST00000358771 SLC26A8Q96RN1 970 aa18.06■□□□□ 0.48
SIRPA-202ENST00000358771 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
SIRPA-202ENST00000358771 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms