RNA–Protein interactions for RNA: ENST00000356226.8

FGFR2-204, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best) BASIC

Gene FGFR2, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-204ENST00000356226 FAM161AQ3B820 660 aa25.17■■□□□ 1.62
FGFR2-204ENST00000356226 CENPJQ9HC77 1338 aaPredicted RBP25.17■■□□□ 1.62
FGFR2-204ENST00000356226 NFKBIBQ15653 356 aa25.16■■□□□ 1.62
FGFR2-204ENST00000356226 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
FGFR2-204ENST00000356226 SCAPERQ9BY12 1400 aa25.15■■□□□ 1.62
FGFR2-204ENST00000356226 SRPK2P78362 688 aaKnown RBP25.15■■□□□ 1.62
FGFR2-204ENST00000356226 BRPF3Q9ULD4 1205 aa25.15■■□□□ 1.62
FGFR2-204ENST00000356226 KANK1Q14678 1352 aa25.14■■□□□ 1.62
FGFR2-204ENST00000356226 ABCC10Q5T3U5 1492 aa25.14■■□□□ 1.62
FGFR2-204ENST00000356226 SLFN5Q08AF3 891 aa25.14■■□□□ 1.62
FGFR2-204ENST00000356226 PLA2R1Q13018 1463 aa25.13■■□□□ 1.61
FGFR2-204ENST00000356226 FRAT2O75474 233 aaPredicted RBP25.13■■□□□ 1.61
FGFR2-204ENST00000356226 IGHDP01880 384 aa25.13■■□□□ 1.61
FGFR2-204ENST00000356226 FTSJ3Q8IY81 847 aaKnown RBP25.13■■□□□ 1.61
FGFR2-204ENST00000356226 STAG3Q9UJ98 1225 aa25.12■■□□□ 1.61
FGFR2-204ENST00000356226 MTHFSP49914 203 aa25.12■■□□□ 1.61
FGFR2-204ENST00000356226 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
FGFR2-204ENST00000356226 CARD14Q9BXL6 1004 aa25.11■■□□□ 1.61
FGFR2-204ENST00000356226 TCP11L2Q8N4U5 519 aa25.11■■□□□ 1.61
FGFR2-204ENST00000356226 CABP2Q9NPB3 220 aa25.11■■□□□ 1.61
FGFR2-204ENST00000356226 NUP160Q12769 1436 aa25.09■■□□□ 1.61
FGFR2-204ENST00000356226 WASHC2CQ9Y4E1 1318 aa25.08■■□□□ 1.61
FGFR2-204ENST00000356226 TSR2Q969E8 191 aaKnown RBP25.08■■□□□ 1.61
FGFR2-204ENST00000356226 E9PSI1 815 aa25.08■■□□□ 1.6
FGFR2-204ENST00000356226 GGNBP2Q9H3C7 697 aa25.07■■□□□ 1.6
FGFR2-204ENST00000356226 CFAP53Q96M91 514 aa25.06■■□□□ 1.6
FGFR2-204ENST00000356226 GZF1Q9H116 711 aaPredicted RBP25.06■■□□□ 1.6
FGFR2-204ENST00000356226 ELL2O00472 640 aaPredicted RBP25.06■■□□□ 1.6
FGFR2-204ENST00000356226 UPF2Q9HAU5 1272 aaKnown RBP25.06■■□□□ 1.6
FGFR2-204ENST00000356226 CDC42BPAQ5VT25 1732 aa25.04■■□□□ 1.6
FGFR2-204ENST00000356226 ADGBQ8N7X0 1667 aa25.04■■□□□ 1.6
FGFR2-204ENST00000356226 ANO8Q9HCE9 1232 aaPredicted RBP25.04■■□□□ 1.6
FGFR2-204ENST00000356226 MAGI2Q86UL8 1455 aa25.03■■□□□ 1.6
FGFR2-204ENST00000356226 ARHGEF12Q9NZN5 1544 aa25.03■■□□□ 1.6
FGFR2-204ENST00000356226 FBLN1P23142 703 aa25.03■■□□□ 1.6
FGFR2-204ENST00000356226 WWC1Q8IX03 1113 aa25.03■■□□□ 1.6
FGFR2-204ENST00000356226 SEC24BO95487 1268 aa25.02■■□□□ 1.6
FGFR2-204ENST00000356226 POGKQ9P215 609 aa25.02■■□□□ 1.6
FGFR2-204ENST00000356226 COL17A1Q9UMD9 1497 aaPredicted RBP25.02■■□□□ 1.6
FGFR2-204ENST00000356226 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
FGFR2-204ENST00000356226 MLECQ14165 292 aa25.01■■□□□ 1.59
FGFR2-204ENST00000356226 ITPRIPQ8IWB1 547 aa25■■□□□ 1.59
FGFR2-204ENST00000356226 EIF3AQ14152 1382 aaKnown RBP25■■□□□ 1.59
FGFR2-204ENST00000356226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
FGFR2-204ENST00000356226 GSE1Q14687 1217 aa25■■□□□ 1.59
FGFR2-204ENST00000356226 MFAP1P55081 439 aaKnown RBP24.99■■□□□ 1.59
FGFR2-204ENST00000356226 SAMD9LQ8IVG5 1584 aa24.99■■□□□ 1.59
FGFR2-204ENST00000356226 SMC4Q9NTJ3 1288 aa24.99■■□□□ 1.59
FGFR2-204ENST00000356226 SOX12O15370 315 aa24.99■■□□□ 1.59
FGFR2-204ENST00000356226 C8orf34Q49A92 452 aa24.98■■□□□ 1.59
FGFR2-204ENST00000356226 SHANK2Q9UPX8 1470 aa24.97■■□□□ 1.59
FGFR2-204ENST00000356226 CFAP65Q6ZU64 1925 aaKnown RBP24.97■■□□□ 1.59
FGFR2-204ENST00000356226 RAPGEF3O95398 923 aa24.96■■□□□ 1.59
FGFR2-204ENST00000356226 MAPK8IP3Q9UPT6 1336 aa24.96■■□□□ 1.59
FGFR2-204ENST00000356226 RLBP1P12271 317 aa24.94■■□□□ 1.58
FGFR2-204ENST00000356226 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
FGFR2-204ENST00000356226 ABCA8O94911 1581 aa24.94■■□□□ 1.58
FGFR2-204ENST00000356226 SLC24A1O60721 1099 aa24.93■■□□□ 1.58
FGFR2-204ENST00000356226 FOXD4L1Q9NU39 408 aa24.93■■□□□ 1.58
FGFR2-204ENST00000356226 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
FGFR2-204ENST00000356226 BECN1Q14457 450 aa24.91■■□□□ 1.58
FGFR2-204ENST00000356226 RUNDC1Q96C34 613 aa24.91■■□□□ 1.58
FGFR2-204ENST00000356226 NUTM2FA1L443 756 aa24.91■■□□□ 1.58
FGFR2-204ENST00000356226 PDZRN3Q9UPQ7 1066 aa24.9■■□□□ 1.58
FGFR2-204ENST00000356226 PLEKHG5O94827 1062 aa24.9■■□□□ 1.58
FGFR2-204ENST00000356226 NSD3Q9BZ95 1437 aa24.9■■□□□ 1.58
FGFR2-204ENST00000356226 PCDHB15Q9Y5E8 787 aa24.9■■□□□ 1.58
FGFR2-204ENST00000356226 GPRASP1Q5JY77 1395 aa24.89■■□□□ 1.58
FGFR2-204ENST00000356226 TTC37Q6PGP7 1564 aa24.89■■□□□ 1.57
FGFR2-204ENST00000356226 CGNL1Q0VF96 1302 aa24.89■■□□□ 1.57
FGFR2-204ENST00000356226 KDM2BQ8NHM5 1336 aa24.89■■□□□ 1.57
FGFR2-204ENST00000356226 APBB1O00213 710 aa24.89■■□□□ 1.57
FGFR2-204ENST00000356226 HSP90AA1P07900 732 aaKnown RBP24.88■■□□□ 1.57
FGFR2-204ENST00000356226 EXOSC9Q06265 439 aaKnown RBP24.87■■□□□ 1.57
FGFR2-204ENST00000356226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.87■■□□□ 1.57
FGFR2-204ENST00000356226 USP35Q9P2H5 1018 aa24.86■■□□□ 1.57
FGFR2-204ENST00000356226 HMOX1P09601 288 aa24.86■■□□□ 1.57
FGFR2-204ENST00000356226 SCAF11Q99590 1463 aaKnown RBP24.85■■□□□ 1.57
FGFR2-204ENST00000356226 RARSP54136 660 aaKnown RBP24.85■■□□□ 1.57
FGFR2-204ENST00000356226 BLMP54132 1417 aaPredicted RBP24.84■■□□□ 1.57
FGFR2-204ENST00000356226 UGGT1Q9NYU2 1555 aa24.84■■□□□ 1.57
FGFR2-204ENST00000356226 PLCH2O75038 1416 aa24.84■■□□□ 1.57
FGFR2-204ENST00000356226 RWDD1Q9H446 243 aaPredicted RBP24.83■■□□□ 1.57
FGFR2-204ENST00000356226 THUMPD2Q9BTF0 503 aaKnown RBP24.83■■□□□ 1.57
FGFR2-204ENST00000356226 WDR7Q9Y4E6 1490 aa24.83■■□□□ 1.56
FGFR2-204ENST00000356226 NOS1P29475 1434 aa24.82■■□□□ 1.56
FGFR2-204ENST00000356226 CROCC2H7BZ55 1655 aa24.82■■□□□ 1.56
FGFR2-204ENST00000356226 MYH16Q9H6N6 1097 aa24.82■■□□□ 1.56
FGFR2-204ENST00000356226 C1orf115Q9H7X2 142 aa24.81■■□□□ 1.56
FGFR2-204ENST00000356226 RIPK4P57078 832 aa24.81■■□□□ 1.56
FGFR2-204ENST00000356226 NKTRP30414 1462 aaKnown RBP24.81■■□□□ 1.56
FGFR2-204ENST00000356226 LNPKQ9C0E8 428 aa24.8■■□□□ 1.56
FGFR2-204ENST00000356226 PMFBP1Q8TBY8 1022 aa24.79■■□□□ 1.56
FGFR2-204ENST00000356226 ZKSCAN2Q63HK3 967 aa24.79■■□□□ 1.56
FGFR2-204ENST00000356226 DZIP1LQ8IYY4 767 aaKnown RBP24.79■■□□□ 1.56
FGFR2-204ENST00000356226 POLR1AO95602 1720 aaPredicted RBP24.79■■□□□ 1.56
FGFR2-204ENST00000356226 CDC42BPBQ9Y5S2 1711 aa24.78■■□□□ 1.56
FGFR2-204ENST00000356226 ZMYM4Q5VZL5 1548 aa24.78■■□□□ 1.56
FGFR2-204ENST00000356226 ZNF521Q96K83 1311 aa24.77■■□□□ 1.56
FGFR2-204ENST00000356226 TRPM1Q7Z4N2 1603 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms