RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 PTPRKQ15262 1439 aa6.07□□□□□ -1.44
CNOT4-202ENST00000356162 MAP3K13O43283 966 aa6.06□□□□□ -1.44
CNOT4-202ENST00000356162 CEP152O94986 1710 aa6.06□□□□□ -1.44
CNOT4-202ENST00000356162 VWDEQ8N2E2 1590 aa6.06□□□□□ -1.44
CNOT4-202ENST00000356162 ABCC3O15438 1527 aa6.06□□□□□ -1.44
CNOT4-202ENST00000356162 CAMSAP1Q5T5Y3 1602 aa6.05□□□□□ -1.44
CNOT4-202ENST00000356162 PREX1Q8TCU6 1659 aa6.05□□□□□ -1.44
CNOT4-202ENST00000356162 LMTK2Q8IWU2 1503 aa6.04□□□□□ -1.44
CNOT4-202ENST00000356162 MLECQ14165 292 aa6.04□□□□□ -1.44
CNOT4-202ENST00000356162 ANKRD50Q9ULJ7 1429 aa6.04□□□□□ -1.44
CNOT4-202ENST00000356162 DCAF8Q5TAQ9 597 aa6.04□□□□□ -1.44
CNOT4-202ENST00000356162 PZPP20742 1482 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 ZNF142P52746 1687 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-202ENST00000356162 NPATQ14207 1427 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 IQGAP3Q86VI3 1631 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 KIF3BO15066 747 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 ASTLQ6HA08 431 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-202ENST00000356162 SGIP1Q9BQI5 828 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 PLSCR2Q9NRY7 297 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 CHIC2Q9UKJ5 165 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 TET3O43151 1660 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 MYO3AQ8NEV4 1616 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 ESF1Q9H501 851 aaKnown RBP6.03□□□□□ -1.44
CNOT4-202ENST00000356162 RRP7BPQ9NSQ0 103 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 HFM1A2PYH4 1435 aa6.03□□□□□ -1.44
CNOT4-202ENST00000356162 EFCAB6Q5THR3 1501 aa6.02□□□□□ -1.45
CNOT4-202ENST00000356162 SPOCK2Q92563 424 aa6.02□□□□□ -1.45
CNOT4-202ENST00000356162 SPATA31D1Q6ZQQ2 1576 aa6.02□□□□□ -1.45
CNOT4-202ENST00000356162 KANK1Q14678 1352 aa6.02□□□□□ -1.45
CNOT4-202ENST00000356162 NAIPQ13075 1403 aa6.02□□□□□ -1.45
CNOT4-202ENST00000356162 ATMINO43313 823 aaPredicted RBP6.02□□□□□ -1.45
CNOT4-202ENST00000356162 TRPC6Q9Y210 931 aa6.02□□□□□ -1.45
CNOT4-202ENST00000356162 ARHGAP31Q2M1Z3 1444 aa6.01□□□□□ -1.45
CNOT4-202ENST00000356162 GSE1Q14687 1217 aa6.01□□□□□ -1.45
CNOT4-202ENST00000356162 GGT6Q6P531 493 aa6.01□□□□□ -1.45
CNOT4-202ENST00000356162 PELP1Q8IZL8 1130 aaKnown RBP6.01□□□□□ -1.45
CNOT4-202ENST00000356162 PCDHB13Q9Y5F0 798 aa6.01□□□□□ -1.45
CNOT4-202ENST00000356162 SETD1BQ9UPS6 1966 aaKnown RBP6.01□□□□□ -1.45
CNOT4-202ENST00000356162 ZMYM3Q14202 1370 aa6.01□□□□□ -1.45
CNOT4-202ENST00000356162 ERVK-7P63135 1459 aa6□□□□□ -1.45
CNOT4-202ENST00000356162 LMTK3Q96Q04 1460 aa6□□□□□ -1.45
CNOT4-202ENST00000356162 ITGAEP38570 1179 aa6□□□□□ -1.45
CNOT4-202ENST00000356162 UHRF1BP1Q6BDS2 1440 aa6□□□□□ -1.45
CNOT4-202ENST00000356162 CEP170BQ9Y4F5 1589 aaPredicted RBP6□□□□□ -1.45
CNOT4-202ENST00000356162 RPRD2Q5VT52 1461 aaKnown RBP6□□□□□ -1.45
CNOT4-202ENST00000356162 PYGBP11216 843 aa6□□□□□ -1.45
CNOT4-202ENST00000356162 LHX8Q68G74 356 aa6□□□□□ -1.45
CNOT4-202ENST00000356162 BMP2KQ9NSY1 1161 aaPredicted RBP6□□□□□ -1.45
CNOT4-202ENST00000356162 TIE1P35590 1138 aa5.99□□□□□ -1.45
CNOT4-202ENST00000356162 IFNL1Q8IU54 200 aa5.99□□□□□ -1.45
CNOT4-202ENST00000356162 WASHC2CQ9Y4E1 1318 aa5.99□□□□□ -1.45
CNOT4-202ENST00000356162 E9PCH4 1651 aa5.99□□□□□ -1.45
CNOT4-202ENST00000356162 A2ML1A8K2U0 1454 aa5.98□□□□□ -1.45
CNOT4-202ENST00000356162 NLRP1Q9C000 1473 aa5.98□□□□□ -1.45
CNOT4-202ENST00000356162 TNRQ92752 1358 aa5.98□□□□□ -1.45
CNOT4-202ENST00000356162 KDM5AP29375 1690 aaKnown RBP5.98□□□□□ -1.45
CNOT4-202ENST00000356162 ATN1P54259 1190 aaPredicted RBP5.98□□□□□ -1.45
CNOT4-202ENST00000356162 SPHKAPQ2M3C7 1700 aa5.97□□□□□ -1.45
CNOT4-202ENST00000356162 SYNMO15061 1565 aa5.97□□□□□ -1.45
CNOT4-202ENST00000356162 CEBPAP49715 358 aaPredicted RBP5.97□□□□□ -1.45
CNOT4-202ENST00000356162 NOS1P29475 1434 aa5.97□□□□□ -1.45
CNOT4-202ENST00000356162 CHRM1P11229 460 aaPredicted RBP5.97□□□□□ -1.45
CNOT4-202ENST00000356162 ACIN1Q9UKV3 1341 aaKnown RBP5.97□□□□□ -1.45
CNOT4-202ENST00000356162 PIK3C2BO00750 1634 aa5.96□□□□□ -1.45
CNOT4-202ENST00000356162 PLA2R1Q13018 1463 aa5.96□□□□□ -1.45
CNOT4-202ENST00000356162 TTLL13PA6NNM8 815 aa5.96□□□□□ -1.46
CNOT4-202ENST00000356162 SETD5Q9C0A6 1442 aa5.96□□□□□ -1.46
CNOT4-202ENST00000356162 POLR1AO95602 1720 aaPredicted RBP5.96□□□□□ -1.46
CNOT4-202ENST00000356162 UBR1Q8IWV7 1749 aa5.96□□□□□ -1.46
CNOT4-202ENST00000356162 ADGRB3O60242 1522 aa5.96□□□□□ -1.46
CNOT4-202ENST00000356162 SLC39A7Q92504 469 aa5.96□□□□□ -1.46
CNOT4-202ENST00000356162 NUP155O75694 1391 aa5.95□□□□□ -1.46
CNOT4-202ENST00000356162 C7P10643 843 aa5.95□□□□□ -1.46
CNOT4-202ENST00000356162 TRPM2O94759 1503 aa5.95□□□□□ -1.46
CNOT4-202ENST00000356162 METRNQ9UJH8 293 aa5.95□□□□□ -1.46
CNOT4-202ENST00000356162 CIZ1Q9ULV3 898 aaPredicted RBP5.95□□□□□ -1.46
CNOT4-202ENST00000356162 CFAP65Q6ZU64 1925 aaKnown RBP5.95□□□□□ -1.46
CNOT4-202ENST00000356162 UGGT1Q9NYU2 1555 aa5.94□□□□□ -1.46
CNOT4-202ENST00000356162 STRCQ7RTU9 1775 aa5.94□□□□□ -1.46
CNOT4-202ENST00000356162 PCDHB8Q9UN66 801 aa5.94□□□□□ -1.46
CNOT4-202ENST00000356162 PTPRTO14522 1441 aa5.93□□□□□ -1.46
CNOT4-202ENST00000356162 RAB3GAP2Q9H2M9 1393 aa5.93□□□□□ -1.46
CNOT4-202ENST00000356162 FBXO31Q5XUX0 539 aaPredicted RBP5.93□□□□□ -1.46
CNOT4-202ENST00000356162 CLTCL1P53675 1640 aa5.93□□□□□ -1.46
CNOT4-202ENST00000356162 SLIT1O75093 1534 aa5.93□□□□□ -1.46
CNOT4-202ENST00000356162 POTEB2H3BUK9 544 aa5.93□□□□□ -1.46
CNOT4-202ENST00000356162 TMEM106CQ9BVX2 250 aa5.93□□□□□ -1.46
CNOT4-202ENST00000356162 ARHGAP23Q9P227 1491 aa5.92□□□□□ -1.46
CNOT4-202ENST00000356162 MYO5BQ9ULV0 1848 aa5.92□□□□□ -1.46
CNOT4-202ENST00000356162 ZNF467Q7Z7K2 595 aaPredicted RBP5.92□□□□□ -1.46
CNOT4-202ENST00000356162 TRIM35Q9UPQ4 493 aa5.92□□□□□ -1.46
CNOT4-202ENST00000356162 TMEM131LA2VDJ0 1609 aa5.92□□□□□ -1.46
CNOT4-202ENST00000356162 NEURL4Q96JN8 1562 aa5.92□□□□□ -1.46
CNOT4-202ENST00000356162 KIF1BO60333 1816 aa5.92□□□□□ -1.46
CNOT4-202ENST00000356162 HRCP23327 699 aa5.91□□□□□ -1.46
CNOT4-202ENST00000356162 TRIM52Q96A61 297 aa5.91□□□□□ -1.46
CNOT4-202ENST00000356162 IQGAP1P46940 1657 aa5.91□□□□□ -1.46
CNOT4-202ENST00000356162 HSPA2P54652 639 aa5.9□□□□□ -1.46
CNOT4-202ENST00000356162 SLC52A1Q9NWF4 448 aa5.9□□□□□ -1.46
CNOT4-202ENST00000356162 MED14O60244 1454 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms