RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZSCAN20P17040 1043 aaPredicted RBP20.04■□□□□ 0.8
RTN3-205ENST00000356000 C20orf194Q5TEA3 1177 aa20.04■□□□□ 0.8
RTN3-205ENST00000356000 CDCA7LQ96GN5 454 aa20.04■□□□□ 0.8
RTN3-205ENST00000356000 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
RTN3-205ENST00000356000 PPP4R3BQ5MIZ7 849 aa20.04■□□□□ 0.8
RTN3-205ENST00000356000 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
RTN3-205ENST00000356000 TMEM51Q9NW97 253 aa20.02■□□□□ 0.8
RTN3-205ENST00000356000 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.79
RTN3-205ENST00000356000 RICTORQ6R327 1708 aa20.01■□□□□ 0.79
RTN3-205ENST00000356000 KIF20AO95235 890 aa20■□□□□ 0.79
RTN3-205ENST00000356000 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
RTN3-205ENST00000356000 RSPH4AQ5TD94 716 aa19.99■□□□□ 0.79
RTN3-205ENST00000356000 PPP1R9BQ96SB3 815 aa19.99■□□□□ 0.79
RTN3-205ENST00000356000 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
RTN3-205ENST00000356000 FANCAO15360 1455 aa19.99■□□□□ 0.79
RTN3-205ENST00000356000 DYNC1I1O14576 645 aa19.99■□□□□ 0.79
RTN3-205ENST00000356000 SEC24BO95487 1268 aa19.99■□□□□ 0.79
RTN3-205ENST00000356000 TBC1D2Q9BYX2 928 aa19.99■□□□□ 0.79
RTN3-205ENST00000356000 PLEKHD1A6NEE1 506 aa19.98■□□□□ 0.79
RTN3-205ENST00000356000 TNNT2P45379 298 aaPredicted RBP19.98■□□□□ 0.79
RTN3-205ENST00000356000 CCDC173Q0VFZ6 552 aa19.98■□□□□ 0.79
RTN3-205ENST00000356000 PCF11O94913 1555 aaKnown RBP19.98■□□□□ 0.79
RTN3-205ENST00000356000 R3HCC1Q9Y3T6 440 aaKnown RBP19.98■□□□□ 0.79
RTN3-205ENST00000356000 CCDC94Q9BW85 323 aaPredicted RBP19.97■□□□□ 0.79
RTN3-205ENST00000356000 PTPRMP28827 1452 aa19.97■□□□□ 0.79
RTN3-205ENST00000356000 KIF15Q9NS87 1388 aa19.97■□□□□ 0.79
RTN3-205ENST00000356000 UQCRHLA0A096LP55 91 aa19.96■□□□□ 0.79
RTN3-205ENST00000356000 UQCRHP07919 91 aa19.96■□□□□ 0.79
RTN3-205ENST00000356000 GTPBP4Q9BZE4 634 aaKnown RBP19.96■□□□□ 0.79
RTN3-205ENST00000356000 DDX11L8A8MPP1 907 aa19.96■□□□□ 0.79
RTN3-205ENST00000356000 GAS2L3Q86XJ1 694 aa19.96■□□□□ 0.79
RTN3-205ENST00000356000 ROCK2O75116 1388 aaKnown RBP19.96■□□□□ 0.79
RTN3-205ENST00000356000 MSNP26038 577 aaKnown RBP19.95■□□□□ 0.78
RTN3-205ENST00000356000 CHMP5Q9NZZ3 219 aa19.95■□□□□ 0.78
RTN3-205ENST00000356000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.95■□□□□ 0.781e-77■■□□□ 12.1
RTN3-205ENST00000356000 RALBP1Q15311 655 aa19.94■□□□□ 0.78
RTN3-205ENST00000356000 ZFYVE16Q7Z3T8 1539 aa19.93■□□□□ 0.78
RTN3-205ENST00000356000 PAXIP1Q6ZW49 1069 aaPredicted RBP19.92■□□□□ 0.78
RTN3-205ENST00000356000 LETM1O95202 739 aaPredicted RBP19.91■□□□□ 0.78
RTN3-205ENST00000356000 ANP32BQ92688 251 aaKnown RBP19.91■□□□□ 0.78
RTN3-205ENST00000356000 TBC1D32Q96NH3 1257 aa19.9■□□□□ 0.78
RTN3-205ENST00000356000 ARID3AQ99856 593 aa19.9■□□□□ 0.78
RTN3-205ENST00000356000 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
RTN3-205ENST00000356000 PLCH2O75038 1416 aa19.9■□□□□ 0.78
RTN3-205ENST00000356000 ZNF500O60304 480 aaPredicted RBP19.89■□□□□ 0.78
RTN3-205ENST00000356000 ZNF830Q96NB3 372 aaPredicted RBP19.89■□□□□ 0.78
RTN3-205ENST00000356000 INSRP06213 1382 aa19.89■□□□□ 0.77
RTN3-205ENST00000356000 REREQ9P2R6 1566 aa19.88■□□□□ 0.77
RTN3-205ENST00000356000 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
RTN3-205ENST00000356000 POLR3GLQ9BT43 218 aa19.88■□□□□ 0.77
RTN3-205ENST00000356000 MADDQ8WXG6 1647 aa19.88■□□□□ 0.77
RTN3-205ENST00000356000 HS1BP3Q53T59 392 aa19.87■□□□□ 0.77
RTN3-205ENST00000356000 TTC37Q6PGP7 1564 aa19.87■□□□□ 0.77
RTN3-205ENST00000356000 PLEKHH2Q8IVE3 1493 aa19.86■□□□□ 0.77
RTN3-205ENST00000356000 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
RTN3-205ENST00000356000 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
RTN3-205ENST00000356000 MAPK8IP3Q9UPT6 1336 aa19.85■□□□□ 0.77
RTN3-205ENST00000356000 KIF14Q15058 1648 aa19.85■□□□□ 0.77
RTN3-205ENST00000356000 MPHOSPH9Q99550 1183 aa19.85■□□□□ 0.77
RTN3-205ENST00000356000 TAF3Q5VWG9 929 aa19.85■□□□□ 0.77
RTN3-205ENST00000356000 ILDR1Q86SU0 546 aaPredicted RBP19.85■□□□□ 0.77
RTN3-205ENST00000356000 UPF2Q9HAU5 1272 aaKnown RBP19.85■□□□□ 0.77
RTN3-205ENST00000356000 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
RTN3-205ENST00000356000 NLRP13Q86W25 1043 aa19.84■□□□□ 0.77
RTN3-205ENST00000356000 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
RTN3-205ENST00000356000 USP47Q96K76 1375 aa19.84■□□□□ 0.77
RTN3-205ENST00000356000 FOXD1Q16676 465 aa19.83■□□□□ 0.76
RTN3-205ENST00000356000 SPRYD3Q8NCJ5 442 aa19.83■□□□□ 0.76
RTN3-205ENST00000356000 NOL7Q9UMY1 257 aaKnown RBP19.83■□□□□ 0.76
RTN3-205ENST00000356000 NASPP49321 788 aaPredicted RBP19.82■□□□□ 0.76
RTN3-205ENST00000356000 EIF3AQ14152 1382 aaKnown RBP19.82■□□□□ 0.76
RTN3-205ENST00000356000 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.82■□□□□ 0.76
RTN3-205ENST00000356000 RIMS1Q86UR5 1692 aaKnown RBP19.81■□□□□ 0.76
RTN3-205ENST00000356000 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
RTN3-205ENST00000356000 ANKRD30BQ9BXX2 1392 aa19.81■□□□□ 0.76
RTN3-205ENST00000356000 CSPP1Q1MSJ5 1256 aa19.81■□□□□ 0.76
RTN3-205ENST00000356000 SKOR2Q2VWA4 1001 aaPredicted RBP19.81■□□□□ 0.76
RTN3-205ENST00000356000 FTSJ3Q8IY81 847 aaKnown RBP19.81■□□□□ 0.76
RTN3-205ENST00000356000 SASS6Q6UVJ0 657 aa19.81■□□□□ 0.76
RTN3-205ENST00000356000 ZNF692Q9BU19 519 aaPredicted RBP19.81■□□□□ 0.76
RTN3-205ENST00000356000 VGLL3A8MV65 326 aa19.8■□□□□ 0.76
RTN3-205ENST00000356000 ATP10AO60312 1499 aa19.8■□□□□ 0.76
RTN3-205ENST00000356000 ARHGEF12Q9NZN5 1544 aa19.79■□□□□ 0.76
RTN3-205ENST00000356000 KDM5CP41229 1560 aa19.79■□□□□ 0.76
RTN3-205ENST00000356000 FBXO41Q8TF61 875 aa19.79■□□□□ 0.76
RTN3-205ENST00000356000 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
RTN3-205ENST00000356000 XPCQ01831 940 aaPredicted RBP19.78■□□□□ 0.76
RTN3-205ENST00000356000 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
RTN3-205ENST00000356000 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
RTN3-205ENST00000356000 LMTK3Q96Q04 1460 aa19.78■□□□□ 0.76
RTN3-205ENST00000356000 PLCD3Q8N3E9 789 aa19.78■□□□□ 0.76
RTN3-205ENST00000356000 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.78■□□□□ 0.76
RTN3-205ENST00000356000 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
RTN3-205ENST00000356000 CCDC144AA2RUR9 1427 aa19.77■□□□□ 0.76
RTN3-205ENST00000356000 RAPGEF3O95398 923 aa19.77■□□□□ 0.76
RTN3-205ENST00000356000 FER1L4A9Z1Z3 1794 aa19.77■□□□□ 0.76
RTN3-205ENST00000356000 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
RTN3-205ENST00000356000 IGHDP01880 384 aa19.77■□□□□ 0.76
RTN3-205ENST00000356000 EFCAB2Q5VUJ9 269 aa19.77■□□□□ 0.76
RTN3-205ENST00000356000 PTMSP20962 102 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms