RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 PLIN1O60240 522 aa22.4■■□□□ 1.18
CDK4-201ENST00000257904 CRBNQ96SW2 442 aa22.38■■□□□ 1.17
CDK4-201ENST00000257904 RNF17Q9BXT8 1623 aaKnown RBP22.38■■□□□ 1.17
CDK4-201ENST00000257904 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
CDK4-201ENST00000257904 MAGI2Q86UL8 1455 aa22.36■■□□□ 1.17
CDK4-201ENST00000257904 CFAP74Q9C0B2 1584 aa22.33■■□□□ 1.17
CDK4-201ENST00000257904 INO80Q9ULG1 1556 aaPredicted RBP22.33■■□□□ 1.17
CDK4-201ENST00000257904 ATP7AQ04656 1500 aa22.32■■□□□ 1.16
CDK4-201ENST00000257904 USP35Q9P2H5 1018 aa22.31■■□□□ 1.16
CDK4-201ENST00000257904 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
CDK4-201ENST00000257904 LAS1LQ9Y4W2 734 aaKnown RBP22.3■■□□□ 1.16
CDK4-201ENST00000257904 C20orf194Q5TEA3 1177 aa22.29■■□□□ 1.16
CDK4-201ENST00000257904 ZNF518AQ6AHZ1 1483 aa22.28■■□□□ 1.16
CDK4-201ENST00000257904 NEFMP07197 916 aa22.28■■□□□ 1.16
CDK4-201ENST00000257904 SKAP1Q86WV1 359 aa22.28■■□□□ 1.16
CDK4-201ENST00000257904 KDM2BQ8NHM5 1336 aa22.28■■□□□ 1.16
CDK4-201ENST00000257904 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.16
CDK4-201ENST00000257904 MADDQ8WXG6 1647 aa22.26■■□□□ 1.15
CDK4-201ENST00000257904 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
CDK4-201ENST00000257904 PPM1GO15355 546 aaPredicted RBP22.26■■□□□ 1.15
CDK4-201ENST00000257904 PPP2R1AP30153 589 aa22.26■■□□□ 1.15
CDK4-201ENST00000257904 DDRGK1Q96HY6 314 aa22.26■■□□□ 1.15
CDK4-201ENST00000257904 NEO1Q92859 1461 aa22.26■■□□□ 1.15
CDK4-201ENST00000257904 GLI2P10070 1586 aa22.25■■□□□ 1.15
CDK4-201ENST00000257904 DUSP27Q5VZP5 1158 aa22.25■■□□□ 1.15
CDK4-201ENST00000257904 KNSTRNQ9Y448 316 aa22.25■■□□□ 1.15
CDK4-201ENST00000257904 MAP3K4Q9Y6R4 1608 aa22.25■■□□□ 1.15
CDK4-201ENST00000257904 POGZQ7Z3K3 1410 aa22.24■■□□□ 1.15
CDK4-201ENST00000257904 ZNF521Q96K83 1311 aa22.24■■□□□ 1.15
CDK4-201ENST00000257904 SYNMO15061 1565 aa22.24■■□□□ 1.15
CDK4-201ENST00000257904 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
CDK4-201ENST00000257904 AMER1Q5JTC6 1135 aaPredicted RBP22.23■■□□□ 1.15
CDK4-201ENST00000257904 KIDINS220Q9ULH0 1771 aa22.23■■□□□ 1.15
CDK4-201ENST00000257904 CENPQQ7L2Z9 268 aaPredicted RBP22.22■■□□□ 1.15
CDK4-201ENST00000257904 DEPDC5O75140 1603 aa22.2■■□□□ 1.14
CDK4-201ENST00000257904 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
CDK4-201ENST00000257904 ASXL1Q8IXJ9 1541 aa22.19■■□□□ 1.14
CDK4-201ENST00000257904 PIK3C2GO75747 1445 aa22.19■■□□□ 1.14
CDK4-201ENST00000257904 KIF3BO15066 747 aa22.19■■□□□ 1.14
CDK4-201ENST00000257904 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
CDK4-201ENST00000257904 SCAF11Q99590 1463 aaKnown RBP22.18■■□□□ 1.14
CDK4-201ENST00000257904 MLH3Q9UHC1 1453 aa22.18■■□□□ 1.14
CDK4-201ENST00000257904 SPHKAPQ2M3C7 1700 aa22.18■■□□□ 1.14
CDK4-201ENST00000257904 DIP2BQ9P265 1576 aa22.17■■□□□ 1.14
CDK4-201ENST00000257904 FAM69CQ0P6D2 419 aa22.17■■□□□ 1.14
CDK4-201ENST00000257904 TRPM2O94759 1503 aa22.17■■□□□ 1.14
CDK4-201ENST00000257904 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.16■■□□□ 1.14
CDK4-201ENST00000257904 KANK1Q14678 1352 aa22.16■■□□□ 1.14
CDK4-201ENST00000257904 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
CDK4-201ENST00000257904 MYOM1P52179 1685 aa22.15■■□□□ 1.14
CDK4-201ENST00000257904 CEP152O94986 1710 aa22.14■■□□□ 1.13
CDK4-201ENST00000257904 HECW2Q9P2P5 1572 aa22.14■■□□□ 1.13
CDK4-201ENST00000257904 SLFN5Q08AF3 891 aa22.14■■□□□ 1.13
CDK4-201ENST00000257904 RAPGEF3O95398 923 aa22.13■■□□□ 1.13
CDK4-201ENST00000257904 FAM161AQ3B820 660 aa22.13■■□□□ 1.13
CDK4-201ENST00000257904 STAC3Q96MF2 364 aa22.13■■□□□ 1.13
CDK4-201ENST00000257904 TET3O43151 1660 aa22.12■■□□□ 1.13
CDK4-201ENST00000257904 TRMT2AQ8IZ69 625 aaKnown RBP22.11■■□□□ 1.13
CDK4-201ENST00000257904 VWDEQ8N2E2 1590 aa22.11■■□□□ 1.13
CDK4-201ENST00000257904 C8orf34Q49A92 452 aa22.11■■□□□ 1.13
CDK4-201ENST00000257904 PTPRTO14522 1441 aa22.11■■□□□ 1.13
CDK4-201ENST00000257904 CLTCL1P53675 1640 aa22.1■■□□□ 1.13
CDK4-201ENST00000257904 MROH1Q8NDA8 1641 aa22.09■■□□□ 1.13
CDK4-201ENST00000257904 EIF3AQ14152 1382 aaKnown RBP22.08■■□□□ 1.13
CDK4-201ENST00000257904 RICTORQ6R327 1708 aa22.08■■□□□ 1.13
CDK4-201ENST00000257904 NKTRP30414 1462 aaKnown RBP22.07■■□□□ 1.12
CDK4-201ENST00000257904 KDM5AP29375 1690 aaKnown RBP22.07■■□□□ 1.12
CDK4-201ENST00000257904 FRMPD1Q5SYB0 1578 aa22.07■■□□□ 1.12
CDK4-201ENST00000257904 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
CDK4-201ENST00000257904 IL27Q8NEV9 243 aa22.07■■□□□ 1.12
CDK4-201ENST00000257904 ABCA6Q8N139 1617 aa22.06■■□□□ 1.12
CDK4-201ENST00000257904 KIAA1210Q9ULL0 1709 aa22.05■■□□□ 1.12
CDK4-201ENST00000257904 SLC4A3P48751 1232 aa22.05■■□□□ 1.12
CDK4-201ENST00000257904 NFKBIBQ15653 356 aa22.05■■□□□ 1.12
CDK4-201ENST00000257904 DAXXQ9UER7 740 aaPredicted RBP22.05■■□□□ 1.12
CDK4-201ENST00000257904 SPINK5Q9NQ38 1064 aaPredicted RBP22.04■■□□□ 1.12
CDK4-201ENST00000257904 PPRC1Q5VV67 1664 aaKnown RBP22.03■■□□□ 1.12
CDK4-201ENST00000257904 APAF1O14727 1248 aa22.03■■□□□ 1.12
CDK4-201ENST00000257904 TSPOAP1O95153 1857 aa22.02■■□□□ 1.12
CDK4-201ENST00000257904 E9PSI1 815 aa22.01■■□□□ 1.11
CDK4-201ENST00000257904 DIP2CQ9Y2E4 1556 aa22.01■■□□□ 1.11
CDK4-201ENST00000257904 RGS3P49796 1198 aa22■■□□□ 1.11
CDK4-201ENST00000257904 GSE1Q14687 1217 aa22■■□□□ 1.11
CDK4-201ENST00000257904 NEURL4Q96JN8 1562 aa22■■□□□ 1.11
CDK4-201ENST00000257904 BCAR3O75815 825 aa21.99■■□□□ 1.11
CDK4-201ENST00000257904 ERVK-7P63135 1459 aa21.99■■□□□ 1.11
CDK4-201ENST00000257904 EFCAB6Q5THR3 1501 aa21.98■■□□□ 1.11
CDK4-201ENST00000257904 LMTK2Q8IWU2 1503 aa21.98■■□□□ 1.11
CDK4-201ENST00000257904 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
CDK4-201ENST00000257904 SLC24A1O60721 1099 aa21.97■■□□□ 1.11
CDK4-201ENST00000257904 KIF13AQ9H1H9 1805 aa21.97■■□□□ 1.11
CDK4-201ENST00000257904 YEATS2Q9ULM3 1422 aa21.96■■□□□ 1.11
CDK4-201ENST00000257904 GGT6Q6P531 493 aa21.96■■□□□ 1.11
CDK4-201ENST00000257904 MYOM2P54296 1465 aa21.95■■□□□ 1.1
CDK4-201ENST00000257904 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
CDK4-201ENST00000257904 CARD14Q9BXL6 1004 aa21.94■■□□□ 1.1
CDK4-201ENST00000257904 UGGT1Q9NYU2 1555 aa21.94■■□□□ 1.1
CDK4-201ENST00000257904 NINLQ9Y2I6 1382 aa21.93■■□□□ 1.1
CDK4-201ENST00000257904 CGNL1Q0VF96 1302 aa21.93■■□□□ 1.1
CDK4-201ENST00000257904 VIRMAQ69YN4 1812 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms