RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ERBINQ96RT1 1412 aa19.98■□□□□ 0.79
SIN3B-201ENST00000248054 FANCAO15360 1455 aa19.98■□□□□ 0.79
SIN3B-201ENST00000248054 NBPF1Q3BBV0 1214 aa19.97■□□□□ 0.79
SIN3B-201ENST00000248054 AMPHP49418 695 aa19.96■□□□□ 0.79
SIN3B-201ENST00000248054 A0A0G2JS52 829 aa19.96■□□□□ 0.79
SIN3B-201ENST00000248054 TARBP1Q13395 1621 aaKnown RBP19.96■□□□□ 0.79
SIN3B-201ENST00000248054 RSPH6AQ9H0K4 717 aa19.96■□□□□ 0.79
SIN3B-201ENST00000248054 SMC4Q9NTJ3 1288 aa19.95■□□□□ 0.78
SIN3B-201ENST00000248054 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
SIN3B-201ENST00000248054 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
SIN3B-201ENST00000248054 DISP1Q96F81 1524 aa19.94■□□□□ 0.78
SIN3B-201ENST00000248054 PTPRKQ15262 1439 aa19.93■□□□□ 0.78
SIN3B-201ENST00000248054 PKNOX2Q96KN3 472 aa19.93■□□□□ 0.78
SIN3B-201ENST00000248054 RAPGEF3O95398 923 aa19.93■□□□□ 0.78
SIN3B-201ENST00000248054 VSIG10Q8N0Z9 540 aa19.93■□□□□ 0.78
SIN3B-201ENST00000248054 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
SIN3B-201ENST00000248054 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
SIN3B-201ENST00000248054 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
SIN3B-201ENST00000248054 POGZQ7Z3K3 1410 aa19.92■□□□□ 0.78
SIN3B-201ENST00000248054 STK31Q9BXU1 1019 aa19.92■□□□□ 0.78
SIN3B-201ENST00000248054 RUNDC1Q96C34 613 aa19.92■□□□□ 0.78
SIN3B-201ENST00000248054 ITPRIPQ8IWB1 547 aa19.91■□□□□ 0.78
SIN3B-201ENST00000248054 HDAC5Q9UQL6 1122 aa19.91■□□□□ 0.78
SIN3B-201ENST00000248054 DHX29Q7Z478 1369 aaKnown RBP19.9■□□□□ 0.78
SIN3B-201ENST00000248054 DENND4BO75064 1496 aaPredicted RBP19.9■□□□□ 0.78
SIN3B-201ENST00000248054 MAPKBP1O60336 1514 aa19.9■□□□□ 0.78
SIN3B-201ENST00000248054 TMEM132EQ6IEE7 984 aa19.9■□□□□ 0.78
SIN3B-201ENST00000248054 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
SIN3B-201ENST00000248054 UBE2Q2Q8WVN8 375 aa19.89■□□□□ 0.77
SIN3B-201ENST00000248054 APAF1O14727 1248 aa19.89■□□□□ 0.77
SIN3B-201ENST00000248054 OS9Q13438 667 aaPredicted RBP19.88■□□□□ 0.77
SIN3B-201ENST00000248054 GSE1Q14687 1217 aa19.87■□□□□ 0.77
SIN3B-201ENST00000248054 WDR7Q9Y4E6 1490 aa19.87■□□□□ 0.77
SIN3B-201ENST00000248054 FAM135AQ9P2D6 1515 aa19.87■□□□□ 0.77
SIN3B-201ENST00000248054 CSB-PGBD3P0DP91 1061 aa19.86■□□□□ 0.77
SIN3B-201ENST00000248054 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
SIN3B-201ENST00000248054 L1TD1Q5T7N2 865 aaKnown RBP19.86■□□□□ 0.77
SIN3B-201ENST00000248054 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
SIN3B-201ENST00000248054 CENPQQ7L2Z9 268 aaPredicted RBP19.84■□□□□ 0.77
SIN3B-201ENST00000248054 CABP2Q9NPB3 220 aa19.84■□□□□ 0.77
SIN3B-201ENST00000248054 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
SIN3B-201ENST00000248054 HMMRO75330 724 aa19.83■□□□□ 0.76
SIN3B-201ENST00000248054 SYCP2Q9BX26 1530 aa19.83■□□□□ 0.76
SIN3B-201ENST00000248054 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
SIN3B-201ENST00000248054 ATAD2Q6PL18 1390 aa19.83■□□□□ 0.76
SIN3B-201ENST00000248054 AAMPQ13685 434 aa19.83■□□□□ 0.76
SIN3B-201ENST00000248054 NUTM2FA1L443 756 aa19.82■□□□□ 0.76
SIN3B-201ENST00000248054 RRP7AQ9Y3A4 280 aaKnown RBP19.82■□□□□ 0.76
SIN3B-201ENST00000248054 ZKSCAN2Q63HK3 967 aa19.82■□□□□ 0.76
SIN3B-201ENST00000248054 BRPF3Q9ULD4 1205 aa19.82■□□□□ 0.76
SIN3B-201ENST00000248054 THEMISQ8N1K5 641 aaPredicted RBP19.82■□□□□ 0.76
SIN3B-201ENST00000248054 PTMAP06454 111 aaKnown RBP19.81■□□□□ 0.76
SIN3B-201ENST00000248054 PTMSP20962 102 aa19.8■□□□□ 0.76
SIN3B-201ENST00000248054 PRAM1Q96QH2 718 aa19.8■□□□□ 0.76
SIN3B-201ENST00000248054 MCCP23508 829 aa19.79■□□□□ 0.76
SIN3B-201ENST00000248054 KDM5BQ9UGL1 1544 aa19.79■□□□□ 0.76
SIN3B-201ENST00000248054 TXNDC2Q86VQ3 553 aa19.79■□□□□ 0.76
SIN3B-201ENST00000248054 HSCBQ8IWL3 235 aa19.79■□□□□ 0.76
SIN3B-201ENST00000248054 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
SIN3B-201ENST00000248054 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
SIN3B-201ENST00000248054 HSP90AB1P08238 724 aaKnown RBP19.78■□□□□ 0.76
SIN3B-201ENST00000248054 ADGRL2O95490 1459 aa19.78■□□□□ 0.76
SIN3B-201ENST00000248054 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
SIN3B-201ENST00000248054 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
SIN3B-201ENST00000248054 HSP90AA2PQ14568 343 aaPredicted RBP19.77■□□□□ 0.76
SIN3B-201ENST00000248054 ZNF692Q9BU19 519 aaPredicted RBP19.77■□□□□ 0.75
SIN3B-201ENST00000248054 ADAMTS8Q9UP79 889 aa19.77■□□□□ 0.75
SIN3B-201ENST00000248054 ZRSR1Q15695 479 aaKnown RBP19.76■□□□□ 0.75
SIN3B-201ENST00000248054 RIPK4P57078 832 aa19.76■□□□□ 0.75
SIN3B-201ENST00000248054 GGNBP2Q9H3C7 697 aa19.75■□□□□ 0.75
SIN3B-201ENST00000248054 SCAF11Q99590 1463 aaKnown RBP19.75■□□□□ 0.75
SIN3B-201ENST00000248054 RALGAPBQ86X10 1494 aa19.75■□□□□ 0.75
SIN3B-201ENST00000248054 MTHFSP49914 203 aa19.75■□□□□ 0.75
SIN3B-201ENST00000248054 TEX14Q8IWB6 1497 aa19.74■□□□□ 0.75
SIN3B-201ENST00000248054 GNAI1P63096 354 aa19.74■□□□□ 0.75
SIN3B-201ENST00000248054 CLUAP1Q96AJ1 413 aa19.74■□□□□ 0.75
SIN3B-201ENST00000248054 ABCC10Q5T3U5 1492 aa19.73■□□□□ 0.75
SIN3B-201ENST00000248054 EXOC6Q8TAG9 804 aa19.73■□□□□ 0.75
SIN3B-201ENST00000248054 A2MP01023 1474 aa19.72■□□□□ 0.75
SIN3B-201ENST00000248054 CRBNQ96SW2 442 aa19.72■□□□□ 0.75
SIN3B-201ENST00000248054 DDX19BQ9UMR2 479 aa19.72■□□□□ 0.75
SIN3B-201ENST00000248054 KIF16BQ96L93 1317 aa19.72■□□□□ 0.75
SIN3B-201ENST00000248054 PSME1Q06323 249 aa19.71■□□□□ 0.75
SIN3B-201ENST00000248054 LTV1Q96GA3 475 aaPredicted RBP19.71■□□□□ 0.75
SIN3B-201ENST00000248054 CDK19Q9BWU1 502 aa19.71■□□□□ 0.75
SIN3B-201ENST00000248054 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
SIN3B-201ENST00000248054 API5Q9BZZ5 524 aaKnown RBP19.7■□□□□ 0.74
SIN3B-201ENST00000248054 ARHGEF12Q9NZN5 1544 aa19.7■□□□□ 0.74
SIN3B-201ENST00000248054 C1orf141Q5JVX7 400 aa19.7■□□□□ 0.74
SIN3B-201ENST00000248054 PDE4AP27815 886 aa19.69■□□□□ 0.74
SIN3B-201ENST00000248054 SMG6Q86US8 1419 aaKnown RBP19.68■□□□□ 0.74
SIN3B-201ENST00000248054 KCNJ4P48050 445 aa19.68■□□□□ 0.74
SIN3B-201ENST00000248054 EIF2AK4Q9P2K8 1649 aaKnown RBP19.68■□□□□ 0.74
SIN3B-201ENST00000248054 DNTTIP2Q5QJE6 756 aaKnown RBP19.67■□□□□ 0.74
SIN3B-201ENST00000248054 TRAPPC8Q9Y2L5 1435 aa19.67■□□□□ 0.74
SIN3B-201ENST00000248054 PLIN1O60240 522 aa19.67■□□□□ 0.74
SIN3B-201ENST00000248054 SLC4A3P48751 1232 aa19.67■□□□□ 0.74
SIN3B-201ENST00000248054 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
SIN3B-201ENST00000248054 TCP11L2Q8N4U5 519 aa19.66■□□□□ 0.74
SIN3B-201ENST00000248054 GOLGA6L6A8MZA4 724 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms