RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
RAB3D-201ENST00000222120 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
RAB3D-201ENST00000222120 DNMT1P26358 1616 aaKnown RBP17.41■□□□□ 0.38
RAB3D-201ENST00000222120 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
RAB3D-201ENST00000222120 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
RAB3D-201ENST00000222120 ADGRF5Q8IZF2 1346 aa17.39■□□□□ 0.37
RAB3D-201ENST00000222120 MYH16Q9H6N6 1097 aa17.38■□□□□ 0.37
RAB3D-201ENST00000222120 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
RAB3D-201ENST00000222120 TESK2Q96S53 571 aa17.37■□□□□ 0.37
RAB3D-201ENST00000222120 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
RAB3D-201ENST00000222120 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
RAB3D-201ENST00000222120 SYCP2Q9BX26 1530 aa17.36■□□□□ 0.37
RAB3D-201ENST00000222120 SPATA31E1Q6ZUB1 1445 aa17.35■□□□□ 0.37
RAB3D-201ENST00000222120 RALGAPBQ86X10 1494 aa17.35■□□□□ 0.37
RAB3D-201ENST00000222120 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
RAB3D-201ENST00000222120 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
RAB3D-201ENST00000222120 STAC3Q96MF2 364 aa17.34■□□□□ 0.37
RAB3D-201ENST00000222120 APBB1O00213 710 aa17.33■□□□□ 0.36
RAB3D-201ENST00000222120 PER1O15534 1290 aaPredicted RBP17.33■□□□□ 0.36
RAB3D-201ENST00000222120 MS4A1P11836 297 aa17.33■□□□□ 0.36
RAB3D-201ENST00000222120 RWDD1Q9H446 243 aaPredicted RBP17.33■□□□□ 0.36
RAB3D-201ENST00000222120 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.36
RAB3D-201ENST00000222120 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
RAB3D-201ENST00000222120 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
RAB3D-201ENST00000222120 NUP160Q12769 1436 aa17.32■□□□□ 0.36
RAB3D-201ENST00000222120 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
RAB3D-201ENST00000222120 ITSN2Q9NZM3 1697 aa17.31■□□□□ 0.36
RAB3D-201ENST00000222120 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
RAB3D-201ENST00000222120 TRAPPC8Q9Y2L5 1435 aa17.31■□□□□ 0.36
RAB3D-201ENST00000222120 GCC2Q8IWJ2 1684 aa17.3■□□□□ 0.36
RAB3D-201ENST00000222120 MFAP1P55081 439 aaKnown RBP17.3■□□□□ 0.36
RAB3D-201ENST00000222120 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
RAB3D-201ENST00000222120 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
RAB3D-201ENST00000222120 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.28■□□□□ 0.36
RAB3D-201ENST00000222120 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
RAB3D-201ENST00000222120 HMOX1P09601 288 aa17.27■□□□□ 0.35
RAB3D-201ENST00000222120 RIPK4P57078 832 aa17.27■□□□□ 0.35
RAB3D-201ENST00000222120 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
RAB3D-201ENST00000222120 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
RAB3D-201ENST00000222120 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
RAB3D-201ENST00000222120 DUSP27Q5VZP5 1158 aa17.26■□□□□ 0.35
RAB3D-201ENST00000222120 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
RAB3D-201ENST00000222120 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
RAB3D-201ENST00000222120 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
RAB3D-201ENST00000222120 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
RAB3D-201ENST00000222120 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
RAB3D-201ENST00000222120 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
RAB3D-201ENST00000222120 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
RAB3D-201ENST00000222120 PLCH2O75038 1416 aa17.23■□□□□ 0.35
RAB3D-201ENST00000222120 WWC1Q8IX03 1113 aa17.23■□□□□ 0.35
RAB3D-201ENST00000222120 LRRIQ1Q96JM4 1722 aa17.23■□□□□ 0.35
RAB3D-201ENST00000222120 GZF1Q9H116 711 aaPredicted RBP17.22■□□□□ 0.35
RAB3D-201ENST00000222120 ADGRL1O94910 1474 aa17.22■□□□□ 0.35
RAB3D-201ENST00000222120 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.35
RAB3D-201ENST00000222120 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
RAB3D-201ENST00000222120 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.35
RAB3D-201ENST00000222120 A2MP01023 1474 aa17.21■□□□□ 0.34
RAB3D-201ENST00000222120 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
RAB3D-201ENST00000222120 FANCAO15360 1455 aa17.2■□□□□ 0.34
RAB3D-201ENST00000222120 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
RAB3D-201ENST00000222120 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
RAB3D-201ENST00000222120 SHANK2Q9UPX8 1470 aa17.19■□□□□ 0.34
RAB3D-201ENST00000222120 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
RAB3D-201ENST00000222120 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
RAB3D-201ENST00000222120 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
RAB3D-201ENST00000222120 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
RAB3D-201ENST00000222120 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
RAB3D-201ENST00000222120 SCAF11Q99590 1463 aaKnown RBP17.17■□□□□ 0.34
RAB3D-201ENST00000222120 IDI1Q13907 227 aa17.17■□□□□ 0.34
RAB3D-201ENST00000222120 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
RAB3D-201ENST00000222120 TPRNQ4KMQ1 711 aa17.17■□□□□ 0.34
RAB3D-201ENST00000222120 NOS1P29475 1434 aa17.17■□□□□ 0.34
RAB3D-201ENST00000222120 HSCBQ8IWL3 235 aa17.16■□□□□ 0.34
RAB3D-201ENST00000222120 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
RAB3D-201ENST00000222120 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
RAB3D-201ENST00000222120 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
RAB3D-201ENST00000222120 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
RAB3D-201ENST00000222120 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
RAB3D-201ENST00000222120 FBLN1P23142 703 aa17.16■□□□□ 0.34
RAB3D-201ENST00000222120 ARHGEF12Q9NZN5 1544 aa17.15■□□□□ 0.34
RAB3D-201ENST00000222120 FBXO31Q5XUX0 539 aaPredicted RBP17.15■□□□□ 0.34
RAB3D-201ENST00000222120 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
RAB3D-201ENST00000222120 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
RAB3D-201ENST00000222120 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
RAB3D-201ENST00000222120 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
RAB3D-201ENST00000222120 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
RAB3D-201ENST00000222120 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 COG3Q96JB2 828 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 DUOX2Q9NRD8 1548 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
RAB3D-201ENST00000222120 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
RAB3D-201ENST00000222120 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
RAB3D-201ENST00000222120 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
RAB3D-201ENST00000222120 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
RAB3D-201ENST00000222120 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
RAB3D-201ENST00000222120 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms