RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 NPNTQ6UXI9 565 aa7.08□□□□□ -1.28
RTTN-217ENST00000640393 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.08□□□□□ -1.28
RTTN-217ENST00000640393 HTR3DQ70Z44 454 aa7.08□□□□□ -1.28
RTTN-217ENST00000640393 CELF5Q8N6W0 485 aaKnown RBP7.08□□□□□ -1.28
RTTN-217ENST00000640393 NSUN7Q8NE18 718 aaKnown RBP7.08□□□□□ -1.28
RTTN-217ENST00000640393 TIFAQ96CG3 184 aa7.08□□□□□ -1.28
RTTN-217ENST00000640393 SLC2A4RGQ9NR83 387 aa7.08□□□□□ -1.28
RTTN-217ENST00000640393 AURKAIP1Q9NWT8 199 aaPredicted RBP7.08□□□□□ -1.28
RTTN-217ENST00000640393 CEP72Q9P209 647 aa7.08□□□□□ -1.28
RTTN-217ENST00000640393 USP25Q9UHP3 1055 aa7.08□□□□□ -1.28
RTTN-217ENST00000640393 REXO2Q9Y3B8 237 aaKnown RBP7.08□□□□□ -1.28
RTTN-217ENST00000640393 CCDC78A2IDD5 438 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 GRXCR1A8MXD5 290 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 H3BML4 177 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 NCR1O76036 304 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 PIK3CGP48736 1102 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 NKX6-1P78426 367 aaPredicted RBP7.07□□□□□ -1.28
RTTN-217ENST00000640393 SLC25A3Q00325 362 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 PUM1Q14671 1186 aaKnown RBP eCLIP7.07□□□□□ -1.28
RTTN-217ENST00000640393 OR56A1Q8NGH5 318 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 B3GNT5Q9BYG0 378 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 MRPL46Q9H2W6 279 aaKnown RBP7.07□□□□□ -1.28
RTTN-217ENST00000640393 WDCPQ9H6R7 721 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 C1orf112Q9NSG2 853 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 GNL3LQ9NVN8 582 aaKnown RBP7.07□□□□□ -1.28
RTTN-217ENST00000640393 JKAMPQ9P055 326 aa7.07□□□□□ -1.28
RTTN-217ENST00000640393 ZNF785A8K8V0 405 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 ERC2O15083 957 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 ERN1O75460 977 aaKnown RBP7.06□□□□□ -1.28
RTTN-217ENST00000640393 TUSC2O75896 110 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 NDUFA10O95299 355 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 GJB1P08034 283 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 HDCP19113 662 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 HSD11B2P80365 405 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 EXOSC9Q06265 439 aaKnown RBP7.06□□□□□ -1.28
RTTN-217ENST00000640393 FOXE3Q13461 319 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 FGL2Q14314 439 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 ZFPM1Q8IX07 1006 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 ZNF276Q8N554 614 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 AOPEPQ8N6M6 819 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 TMIEQ8NEW7 156 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 TLR10Q9BXR5 811 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 SARS2Q9NP81 518 aaKnown RBP7.06□□□□□ -1.28
RTTN-217ENST00000640393 KLHL11Q9NVR0 708 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 CDYLQ9Y232 598 aa7.06□□□□□ -1.28
RTTN-217ENST00000640393 A0A1B0GTW7 788 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 A6NNZ2 444 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 SPATA31D3P0C874 917 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 KITP10721 976 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 KCNJ5P48544 419 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 RAB1AP62820 205 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 LSM12Q3MHD2 195 aaKnown RBP7.05□□□□□ -1.28
RTTN-217ENST00000640393 AGAP9Q5VTM2 703 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 FOXR2Q6PJQ5 311 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 SLC30A10Q6XR72 485 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 SPATA31D4Q6ZUB0 917 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 CCDC149Q6ZUS6 474 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 FAM90A1Q86YD7 464 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 RHOT2Q8IXI1 618 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 KLHL32Q96NJ5 620 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 AKIP1Q9NQ31 210 aa7.05□□□□□ -1.28
RTTN-217ENST00000640393 MTO1Q9Y2Z2 717 aaKnown RBP7.05□□□□□ -1.28
RTTN-217ENST00000640393 PRSS29PA6NIE9 313 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 TRIM24O15164 1050 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 VPS4BO75351 444 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 GPANK1O95872 356 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 FCER1AP12319 257 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 GCSHP23434 173 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 ANO6Q4KMQ2 910 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 HSP90AB2PQ58FF8 381 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 ZNF365Q70YC5 407 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 MAPKAPK5Q8IW41 473 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 BRIX1Q8TDN6 353 aaKnown RBP7.04□□□□□ -1.28
RTTN-217ENST00000640393 SLC25A43Q8WUT9 341 aaPredicted RBP7.04□□□□□ -1.28
RTTN-217ENST00000640393 MTFMTQ96DP5 389 aaKnown RBP7.04□□□□□ -1.28
RTTN-217ENST00000640393 FAM167AQ96KS9 214 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 NRDE2Q9H7Z3 1164 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
RTTN-217ENST00000640393 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.04□□□□□ -1.28
RTTN-217ENST00000640393 A0A088AWK7 358 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 CFAP69A5D8W1 941 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 MATN4O95460 622 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 FTH1P19P0C7X4 201 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 FGFR4P22455 802 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 NR4A1P22736 598 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 ZNF135P52742 658 aaPredicted RBP7.03□□□□□ -1.28
RTTN-217ENST00000640393 SLFN5Q08AF3 891 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 RESTQ13127 1097 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 ZXDCQ2QGD7 858 aaPredicted RBP7.03□□□□□ -1.28
RTTN-217ENST00000640393 PDPRQ8NCN5 879 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 FAM156AQ8NDB6 213 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 NUP133Q8WUM0 1156 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 RNF31Q96EP0 1072 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 ZNF503Q96F45 646 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 CCDC136Q96JN2 1154 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 VPS11Q9H270 941 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 ZNF703Q9H7S9 590 aaPredicted RBP7.03□□□□□ -1.28
RTTN-217ENST00000640393 FAM204AQ9H8W3 233 aa7.03□□□□□ -1.28
RTTN-217ENST00000640393 ZMAT3Q9HA38 289 aaKnown RBP7.03□□□□□ -1.28
RTTN-217ENST00000640393 RSAD1Q9HA92 442 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms