RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 MAPK8IP1Q9UQF2 711 aa17.15■□□□□ 0.34
SPIN3-233ENST00000640039 FAM50BQ9Y247 325 aa17.15■□□□□ 0.34
SPIN3-233ENST00000640039 PCDHA5Q9Y5H7 936 aa17.15■□□□□ 0.34
SPIN3-233ENST00000640039 HCFC2Q9Y5Z7 792 aa17.15■□□□□ 0.34
SPIN3-233ENST00000640039 SPDYE4A6NLX3 237 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 I3L4J1 428 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 PDXKO00764 312 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 EXOC3O60645 756 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 TMEM191BP0C7N4 346 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 DLX2Q07687 328 aaPredicted RBP17.14■□□□□ 0.33
SPIN3-233ENST00000640039 CLUL1Q15846 466 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 PSMD5Q16401 504 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 SNRNP35Q16560 246 aaKnown RBP17.14■□□□□ 0.33
SPIN3-233ENST00000640039 PUS10Q3MIT2 529 aaKnown RBP17.14■□□□□ 0.33
SPIN3-233ENST00000640039 ELMSAN1Q6PJG2 1045 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 PRSS55Q6UWB4 352 aaPredicted RBP17.14■□□□□ 0.33
SPIN3-233ENST00000640039 CD300LGQ6UXG3 332 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
SPIN3-233ENST00000640039 ERCC4Q92889 916 aaPredicted RBP17.14■□□□□ 0.33
SPIN3-233ENST00000640039 FBXL18Q96ME1 805 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 KCTD10Q9H3F6 313 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 RXFP1Q9HBX9 757 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 FNIP2Q9P278 1114 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 RAPGEFL1Q9UHV5 662 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 CD207Q9UJ71 328 aa17.14■□□□□ 0.33
SPIN3-233ENST00000640039 SYN3O14994 580 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 TEX28O15482 410 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 FGFR3P22607 806 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 PAX3P23760 479 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
SPIN3-233ENST00000640039 TKTP29401 623 aaKnown RBP17.13■□□□□ 0.33
SPIN3-233ENST00000640039 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
SPIN3-233ENST00000640039 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
SPIN3-233ENST00000640039 C9orf57Q5W0N0 161 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 TMEM184AQ6ZMB5 413 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 ANKS3Q6ZW76 656 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 GLYCTKQ8IVS8 523 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 APPL2Q8NEU8 664 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 VN1R2Q8NFZ6 395 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 ANKRD36BP1Q96IX9 119 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 SUSD3Q96L08 255 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 DZANK1Q9NVP4 752 aa17.13■□□□□ 0.33
SPIN3-233ENST00000640039 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
SPIN3-233ENST00000640039 VWA8A3KMH1 1905 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 ARHGEF37A1IGU5 675 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 GLUD1P00367 558 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 TNNC2P02585 160 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 NR3C1P04150 777 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 HOXB8P17481 243 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-233ENST00000640039 CLCN4P51793 760 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 WNT7BP56706 349 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 CYP24A1Q07973 514 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 KCNC3Q14003 757 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 PTCRAQ6ISU1 281 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-233ENST00000640039 ANKRD54Q6NXT1 300 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 DSTYKQ6XUX3 929 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 SLC9A9Q8IVB4 645 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-233ENST00000640039 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-233ENST00000640039 MSLNLQ96KJ4 702 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 ZNF560Q96MR9 790 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 CLEC1BQ9P126 229 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 DPP7Q9UHL4 492 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
SPIN3-233ENST00000640039 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 H7C4K7 107 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 DLATP10515 647 aaKnown RBP17.11■□□□□ 0.33
SPIN3-233ENST00000640039 EPCAMP16422 314 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
SPIN3-233ENST00000640039 RPL13P26373 211 aaKnown RBP17.11■□□□□ 0.33
SPIN3-233ENST00000640039 TAF6P49848 677 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 LILRA4P59901 499 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 SMAD4Q13485 552 aaKnown RBP17.11■□□□□ 0.33
SPIN3-233ENST00000640039 STIM1Q13586 685 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 MYBPC2Q14324 1141 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 PSMD6Q15008 389 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 USP37Q86T82 979 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 WDR49Q8IV35 697 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
SPIN3-233ENST00000640039 SLC22A17Q8WUG5 538 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 MTMR12Q9C0I1 747 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 MTRRQ9UBK8 725 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 PCDHB8Q9UN66 801 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 TRAF3IP3Q9Y228 551 aa17.11■□□□□ 0.33
SPIN3-233ENST00000640039 PIRO00625 290 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 PPEF2O14830 753 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 ITGB3P05106 788 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 KRT19P08727 400 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 ODC1P11926 461 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 TNNI1P19237 187 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 NR2F2P24468 414 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms