RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ACO2Q99798 780 aaKnown RBP12.31□□□□□ -0.44
CLN6-217ENST00000636964 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
CLN6-217ENST00000636964 PCDHGC5Q9Y5F6 944 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 ADGRA2Q96PE1 1338 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 VNN1O95497 513 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 C22orf31O95567 290 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
CLN6-217ENST00000636964 MMEP08473 750 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 SLC26A2P50443 739 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 ATP1A2P50993 1020 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 EFNA5P52803 228 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 GRM1Q13255 1194 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 TAF1CQ15572 869 aaPredicted RBP12.3□□□□□ -0.44
CLN6-217ENST00000636964 PPTC7Q8NI37 304 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
CLN6-217ENST00000636964 AKT3Q9Y243 479 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 BRCA2P51587 3418 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 H3BRB1 525 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 NDUFAB1O14561 156 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 TOM1L1O75674 476 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 AP1G2O75843 785 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
CLN6-217ENST00000636964 CHRNB2P17787 502 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 GTF2H1P32780 548 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 ZACNQ401N2 412 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 SLC35G2Q8TBE7 412 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 SHC3Q92529 594 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 C16orf70Q9BSU1 422 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 TUT1Q9H6E5 874 aaKnown RBP12.3□□□□□ -0.44
CLN6-217ENST00000636964 KLC4Q9NSK0 619 aa12.3□□□□□ -0.44
CLN6-217ENST00000636964 A0A087WZ62 844 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 CHUKO15111 745 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 FTLP02792 175 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 MAPK4P31152 587 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 MCCD1P59942 119 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 MEI1Q5TIA1 1274 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 NAA35Q5VZE5 725 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 EEF1DP3Q658K8 133 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 CDCA2Q69YH5 1023 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 TMEM130Q8N3G9 435 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 OR6J1Q8NGC5 347 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 TPCN2Q8NHX9 752 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 CTNNBL1Q8WYA6 563 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 G3BP2Q9UN86 482 aaKnown RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 CNTNAP2Q9UHC6 1331 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 DYNC1LI2O43237 492 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 RTN2O75298 545 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 TCP1P17987 556 aaKnown RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 SSTR3P32745 418 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 GUCY1A3Q02108 690 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 CKAP4Q07065 602 aaKnown RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 WDR44Q5JSH3 913 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 KCTD16Q68DU8 428 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 ZPBP2Q6X784 338 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 RASAL3Q86YV0 1011 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 CCDC13Q8IYE1 715 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 LRRC1Q9BTT6 524 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 C1orf112Q9NSG2 853 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 CST3P01034 146 aaPredicted RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 CYP11B1P15538 503 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 ANXA13P27216 316 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 SEC24CP53992 1094 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 SLC7A5Q01650 507 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 CCL14Q16627 93 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 TMEM192Q8IY95 271 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 ABHD16BQ9H3Z7 469 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 APOBEC3GQ9HC16 384 aaKnown RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 FLRT1Q9NZU1 646 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 NOCTQ9UK39 431 aaKnown RBP12.29□□□□□ -0.44
CLN6-217ENST00000636964 GINS2Q9Y248 185 aa12.29□□□□□ -0.44
CLN6-217ENST00000636964 UMODL1Q5DID0 1318 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 GAS2O43903 313 aaKnown RBP12.28□□□□□ -0.44
CLN6-217ENST00000636964 KRT14P02533 472 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 CYP2B6P20813 491 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 CLDN10P78369 228 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 TFDP1Q14186 410 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 ATF7IP2Q5U623 682 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
CLN6-217ENST00000636964 SLC40A1Q9NP59 571 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 BTNL10A8MVZ5 291 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 KCNK3O14649 394 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
CLN6-217ENST00000636964 PRLRP16471 622 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 PTENP60484 403 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 TMEM62Q0P6H9 643 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 ZNF568Q3ZCX4 644 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 LRRC57Q8N9N7 239 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 CPB2Q96IY4 423 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 MTMR12Q9C0I1 747 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms