RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MAP4K3Q8IVH8 894 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 BEST2Q8NFU1 509 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 DDX12PQ92771 950 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 FGF13Q92913 245 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 ZSCAN16Q9H4T2 348 aaPredicted RBP19.49■□□□□ 0.71
PNKP-225ENST00000636214 CA14Q9ULX7 337 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 SRPRBQ9Y5M8 271 aaKnown RBP19.49■□□□□ 0.71
PNKP-225ENST00000636214 WDR27A2RRH5 827 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 LACTBL1A8MY62 500 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 ANHXE9PGG2 379 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 H0Y858 1186 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 K7ELQ4 463 aaPredicted RBP19.48■□□□□ 0.71
PNKP-225ENST00000636214 AOC1P19801 751 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 NMT1P30419 496 aaKnown RBP19.48■□□□□ 0.71
PNKP-225ENST00000636214 LRPAP1P30533 357 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 GTF2BQ00403 316 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 PTPAQ15257 358 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 SLFN12LQ6IEE8 588 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 CCDC73Q6ZRK6 1079 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 DYMQ7RTS9 669 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 OXCT2Q9BYC2 517 aaPredicted RBP19.48■□□□□ 0.71
PNKP-225ENST00000636214 HAPLN2Q9GZV7 340 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 FAM86C1Q9NVL1 165 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 HCFC1R1Q9NWW0 138 aa19.48■□□□□ 0.71
PNKP-225ENST00000636214 DNMT3BQ9UBC3 853 aaKnown RBP19.48■□□□□ 0.71
PNKP-225ENST00000636214 FBXO2Q9UK22 296 aaPredicted RBP19.48■□□□□ 0.71
PNKP-225ENST00000636214 A0A0B4J269 797 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 ARHGEF37A1IGU5 675 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 MEFVO15553 781 aaPredicted RBP19.47■□□□□ 0.71
PNKP-225ENST00000636214 ABLIM3O94929 683 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 RHOP08100 348 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 PTPN2P17706 415 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 YWHAHQ04917 246 aaPredicted RBP19.47■□□□□ 0.71
PNKP-225ENST00000636214 CWF19L1Q69YN2 538 aaKnown RBP19.47■□□□□ 0.71
PNKP-225ENST00000636214 ADALQ6DHV7 355 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 IQCEQ6IPM2 695 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 ITFG1Q8TB96 612 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 GPR152Q8TDT2 470 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 LRRC15Q8TF66 581 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 ING5Q8WYH8 240 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 HVCN1Q96D96 273 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 MRPL44Q9H9J2 332 aaKnown RBP19.47■□□□□ 0.71
PNKP-225ENST00000636214 SEL1LQ9UBV2 794 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 MAFFQ9ULX9 164 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 EXOC7Q9UPT5 735 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 INSL5Q9Y5Q6 135 aa19.47■□□□□ 0.71
PNKP-225ENST00000636214 TULP1O00294 542 aaPredicted RBP19.46■□□□□ 0.71
PNKP-225ENST00000636214 ZNF197O14709 1029 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 STX6O43752 255 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 GAP43P17677 238 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 STAT6P42226 847 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 ADCY1Q08828 1119 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 MRPL58Q14197 206 aaKnown RBP19.46■□□□□ 0.71
PNKP-225ENST00000636214 TMEM132DQ14C87 1099 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 ENOX2Q16206 610 aaKnown RBP19.46■□□□□ 0.71
PNKP-225ENST00000636214 FAM173BQ6P4H8 233 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 PARM1Q6UWI2 310 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 USP49Q70CQ1 688 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 SFR1Q86XK3 245 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 TCEAL8Q8IYN2 117 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 ST13P5Q8NFI4 369 aaPredicted RBP19.46■□□□□ 0.71
PNKP-225ENST00000636214 FGF14Q92915 247 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 CLIC6Q96NY7 704 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 CORO1BQ9BR76 489 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 TBC1D17Q9HA65 648 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 ARHGEF3Q9NR81 526 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 GDE1Q9NZC3 331 aa19.46■□□□□ 0.71
PNKP-225ENST00000636214 AFF4Q9UHB7 1163 aaKnown RBP19.46■□□□□ 0.71
PNKP-225ENST00000636214 MYH15Q9Y2K3 1946 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 M0QZQ0 153 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 HSP90AA1P07900 732 aaKnown RBP19.45■□□□□ 0.7
PNKP-225ENST00000636214 IDEP14735 1019 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 PAX3P23760 479 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 POSTNQ15063 836 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 STK38Q15208 465 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 ZC2HC1CQ53FD0 456 aaPredicted RBP19.45■□□□□ 0.7
PNKP-225ENST00000636214 ZBTB41Q5SVQ8 909 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 CYP4A22Q5TCH4 519 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 JADE1Q6IE81 842 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 PDZD4Q76G19 769 aaPredicted RBP19.45■□□□□ 0.7
PNKP-225ENST00000636214 NPAS3Q8IXF0 933 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 POMGNT1Q8WZA1 660 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 SHDQ96IW2 340 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 ZNF512Q96ME7 567 aaPredicted RBP19.45■□□□□ 0.7
PNKP-225ENST00000636214 USP28Q96RU2 1077 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 PHOX2BQ99453 314 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 ST6GALNAC4Q9H4F1 302 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 SLC2A4RGQ9NR83 387 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 CPSF3Q9UKF6 684 aaKnown RBP19.45■□□□□ 0.7
PNKP-225ENST00000636214 AGO2Q9UKV8 859 aaKnown RBP19.45■□□□□ 0.7
PNKP-225ENST00000636214 MTMR6Q9Y217 621 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 DERAQ9Y315 318 aa19.45■□□□□ 0.7
PNKP-225ENST00000636214 OR6C75A6NL08 312 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 TBC1D4O60343 1298 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 ODC1P11926 461 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 NPR3P17342 541 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 GUCY2FP51841 1108 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 PFKPQ01813 784 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 PLD1Q13393 1074 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 SLC39A14Q15043 492 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms