RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 OLIG2Q13516 323 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 KIAA0141Q14154 515 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 KIR2DS5Q14953 304 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 RBBP5Q15291 538 aaKnown RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 SHBQ15464 509 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 SLC4A8Q2Y0W8 1093 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF750Q32MQ0 723 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 C11orf91Q3C1V1 193 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 MAP7D1Q3KQU3 841 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 RABL6Q3YEC7 729 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 FAM153CQ494X1 144 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 TAF1BQ53T94 588 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 INO80DQ53TQ3 878 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 DALRD3Q5D0E6 543 aaKnown RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ATAT1Q5SQI0 421 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 PHF19Q5T6S3 580 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 PRAMEF17Q5VTA0 474 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 Q5W150 140 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 SEL1L3Q68CR1 1132 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 IQSEC1Q6DN90 963 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 Q6P435 159 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 SASS6Q6UVJ0 657 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 USP30Q70CQ3 517 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 SMIM29Q86T20 159 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF589Q86UQ0 364 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 AMIGO1Q86WK6 493 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 RASGRP3Q8IV61 690 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 FAM126BQ8IXS8 530 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 HACE1Q8IYU2 909 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ALDH16A1Q8IZ83 802 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 RGL4Q8IZJ4 473 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 CLIP4Q8N3C7 705 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 MSL3Q8N5Y2 521 aaKnown RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 RNF152Q8N8N0 203 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 Q8N9L7 120 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 CCDC71LQ8N9Z2 235 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 LINC00116Q8NCU8 138 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 OR14K1Q8NGZ2 314 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 PPP1R14CQ8TAE6 165 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 FAM76AQ8TAV0 307 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 TBC1D16Q8TBP0 767 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF507Q8TCN5 953 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 XAGE3Q8WTP9 111 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 NXPE3Q969Y0 559 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF501Q96CX3 271 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 FAM122AQ96E09 287 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 PELI1Q96FA3 418 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 BCANQ96GW7 911 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF419Q96HQ0 510 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 NGLY1Q96IV0 654 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 DMRTB1Q96MA1 342 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 NLRP4Q96MN2 994 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 DUX5Q96PT3 197 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 AIFM2Q9BRQ8 373 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 SF3B5Q9BWJ5 86 aaKnown RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 CDADC1Q9BWV3 514 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 CHST8Q9H2A9 424 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 DHX36Q9H2U1 1008 aaKnown RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 PATZ1Q9HBE1 687 aaKnown RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF71Q9NQZ8 489 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 EXD2Q9NVH0 621 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 POLR3EQ9NVU0 708 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 KLHL13Q9P2N7 655 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 IL17BQ9UHF5 180 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 CRLS1Q9UJA2 301 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 PPM1HQ9ULR3 514 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 B3GNT3Q9Y2A9 372 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 CSADQ9Y600 493 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 KCNMB2Q9Y691 235 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 MINK1Q8N4C8 1332 aaPredicted RBP-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 ZMYM2Q9UBW7 1377 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 WDR81Q562E7 1941 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 CACNA1CQ13936 2221 aa-0.76□□□□□ -2.53
CDKL5-210ENST00000636046 USP9YO00507 2555 aaPredicted RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 KCPQ6ZWJ8 1503 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 FAM86C2PA6NEL3 165 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 PANO1I0J062 215 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 SMIM22K7EJ46 135 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 ARHGEF9O43307 516 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 FOXO3O43524 673 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 XPNPEP2O43895 674 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 CUTAO60888 179 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 LRRN2O75325 713 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 IPO13O94829 963 aaKnown RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 ZBTB11O95625 1053 aaPredicted RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 ECDO95905 644 aaPredicted RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 SYF2O95926 243 aaKnown RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 SP9P0CG40 484 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 FGF5P12034 268 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 HK1P19367 917 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 NR1D1P20393 614 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 ENDOUP21128 410 aaKnown RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 IL1R2P27930 398 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 SSFA2P28290 1259 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 APOBEC3AP31941 199 aaPredicted RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 ECI1P42126 302 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 ANXA11P50995 505 aaKnown RBP-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 RIPK4P57078 832 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 CORO7P57737 925 aa-0.77□□□□□ -2.53
CDKL5-210ENST00000636046 BPIFB4P59827 614 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms