RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ETNPPLQ8TBG4 499 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 DCAF4Q8WV16 495 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 C10orf88Q9H8K7 445 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 TXLNGQ9NUQ3 528 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 NENFQ9UMX5 172 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PLCH1Q4KWH8 1693 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 A0A1B0GVG6 124 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 A0A1W2PPM1 405 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MAPK13O15264 365 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 CIB2O75838 187 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 SLITRK3O94933 977 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 TPBGLP0DKB5 382 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 RALAP11233 206 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 KRT10P13645 584 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 GMPSP49915 693 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MTFR1Q15390 333 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MAP7D1Q3KQU3 841 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ATP13A4Q4VNC1 1196 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MDH1BQ5I0G3 518 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ISLR2Q6UXK2 745 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 DSTYKQ6XUX3 929 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ASRGL1Q7L266 308 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MIER3Q7Z3K6 550 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 CCDC89Q8N998 374 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 AGBL3Q8NEM8 1001 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 STK32AQ8WU08 396 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 DNAJC9Q8WXX5 260 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ROPN1BQ9BZX4 212 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 DNAI2Q9GZS0 605 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 TMEM117Q9H0C3 514 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ROPN1Q9HAT0 212 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ZNF70Q9UC06 446 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 TTLL3Q9Y4R7 772 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MYH11P35749 1972 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 FAM47DPA6NHR8 397 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ONECUT3O60422 494 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PEX11AO75192 247 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 CDH16O75309 829 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 LUC7L3O95232 432 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 BAG2O95816 211 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 OAS1P00973 400 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ALADP13716 330 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 IL1R1P14778 569 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MAN1A1P33908 653 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PIK3CAP42336 1068 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PAPOLAP51003 745 aaKnown RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 PPP2R5CQ13362 524 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 XKR9Q5GH70 373 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 IZUMO3Q5VZ72 239 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 CROCCP2Q86T23 111 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 GLIS1Q8NBF1 620 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 FAM151AQ8WW52 585 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 VTI1AQ96AJ9 217 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 BORCS6Q96GS4 357 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 SNF8Q96H20 258 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MAGEB18Q96M61 343 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 TOPORSQ9NS56 1045 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 WRAP73Q9P2S5 460 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-216ENST00000620854 USP20Q9Y2K6 914 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 C2CD2Q9Y426 696 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 ZHX2Q9Y6X8 837 aa7.37□□□□□ -1.23
NEDD9-216ENST00000620854 MYH14Q7Z406 1995 aaKnown RBP7.36□□□□□ -1.23
NEDD9-216ENST00000620854 NCANO14594 1321 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 IQCA1LA6NCM1 817 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 TP73O15350 636 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 SLC16A3O15427 465 aaKnown RBP7.36□□□□□ -1.23
NEDD9-216ENST00000620854 EYA4O95677 639 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 UBTFL6P0CB48 400 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-216ENST00000620854 RPS12P25398 132 aaKnown RBP7.36□□□□□ -1.23
NEDD9-216ENST00000620854 SMARCA1P28370 1054 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 VAMP7P51809 220 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 INHBEP58166 350 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 SPP2Q13103 211 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 LRRC36Q1X8D7 754 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 P3H1Q32P28 736 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 CYTH2Q99418 400 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 KIFC3Q9BVG8 833 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 WNT8AQ9H1J5 351 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 TRABDQ9H4I3 376 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 CCDC134Q9H6E4 229 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 ZFP69BQ9UJL9 534 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 SMCHD1A6NHR9 2005 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 GRIN3BO60391 1043 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 PLS3P13797 630 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 HSPA6P17066 643 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 KLC1Q07866 573 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 RCN1Q15293 331 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 SLC1A5Q15758 541 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 GEN1Q17RS7 908 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 BRDTQ58F21 947 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-216ENST00000620854 MFSD5Q6N075 450 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 EPS8L1Q8TE68 723 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 SLC10A4Q96EP9 437 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 GPRC5CQ9NQ84 441 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 EXOC7Q9UPT5 735 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 TOGARAM1Q9Y4F4 1720 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 ARHGAP42A6NI28 874 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 KRT36O76013 467 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 ITIH2P19823 946 aa7.36□□□□□ -1.23
NEDD9-216ENST00000620854 SHMT1P34896 483 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms