RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 TMEM221A6NGB7 291 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 GOLGA8JA6NMD2 632 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 M0R296 226 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 MEFVO15553 781 aaPredicted RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 TGM5O43548 720 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 RFPL2O75678 378 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 KCNE1P15382 129 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 GARTP22102 1010 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 SOX4Q06945 474 aaPredicted RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 PSMD2Q13200 908 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 XKR4Q5GH76 650 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 CD302Q8IX05 232 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 FMR1NBQ8N0W7 255 aaPredicted RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 TDRD5Q8NAT2 981 aaKnown RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 CMASQ8NFW8 434 aaPredicted RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 ZNF507Q8TCN5 953 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 IPO9Q96P70 1041 aaKnown RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 CPSF3Q9UKF6 684 aaKnown RBP16.75■□□□□ 0.27
XRCC1-206ENST00000597811 NUB1Q9Y5A7 615 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 STYXL1Q9Y6J8 313 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 ANK1P16157 1881 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 UBE4BO95155 1302 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 CCDC195A0A1B0GUA6 201 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 TMEM189-UBE2V1I3L0A0 370 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 PODXLO00592 558 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 CLIC2O15247 247 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 KLRC4O43908 158 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 KINO60870 393 aaKnown RBP16.74■□□□□ 0.27
XRCC1-206ENST00000597811 ADSSP30520 456 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 CREMQ03060 361 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 SIGLEC14Q08ET2 396 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 UPP1Q16831 310 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 LILRA6Q6PI73 481 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 CD300LGQ6UXG3 332 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 CCDC149Q6ZUS6 474 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 C3orf58Q8NDZ4 430 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 BEST2Q8NFU1 509 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 LNX1Q8TBB1 728 aaPredicted RBP16.74■□□□□ 0.27
XRCC1-206ENST00000597811 PIK3R5Q8WYR1 880 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 CBWD1Q9BRT8 395 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 TUBGCP4Q9UGJ1 667 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 DPP7Q9UHL4 492 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 UBQLN1Q9UMX0 589 aaKnown RBP16.74■□□□□ 0.27
XRCC1-206ENST00000597811 USTQ9Y2C2 406 aa16.74■□□□□ 0.27
XRCC1-206ENST00000597811 ARIH1Q9Y4X5 557 aaPredicted RBP16.74■□□□□ 0.27
XRCC1-206ENST00000597811 TRAPPC3O43617 180 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 EXTL3O43909 919 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 GADD45BO75293 160 aaPredicted RBP16.73■□□□□ 0.27
XRCC1-206ENST00000597811 KIF20AO95235 890 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 C1RP00736 705 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 ASGR2P07307 311 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 PLA2G5P39877 138 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 EHHADHQ08426 723 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 DPYDQ12882 1025 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 ELAVL2Q12926 359 aaKnown RBP16.73■□□□□ 0.27
XRCC1-206ENST00000597811 STK4Q13043 487 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 PNOCQ13519 176 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 TMEM132DQ14C87 1099 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 PSMD5Q16401 504 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 KNOP1Q1ED39 458 aaKnown RBP16.73■□□□□ 0.27
XRCC1-206ENST00000597811 JADE1Q6IE81 842 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 ELMSAN1Q6PJG2 1045 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 EPM2AIP1Q7L775 607 aaPredicted RBP16.73■□□□□ 0.27
XRCC1-206ENST00000597811 ZDHHC14Q8IZN3 488 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 KREMEN2Q8NCW0 462 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 HDAC7Q8WUI4 952 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 ZNF707Q96C28 371 aaPredicted RBP16.73■□□□□ 0.27
XRCC1-206ENST00000597811 ASIC4Q96FT7 647 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 CLSTN3Q9BQT9 956 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 SMOC2Q9H3U7 446 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 PLEKHA4Q9H4M7 779 aa16.73■□□□□ 0.27
XRCC1-206ENST00000597811 RBAKQ9NYW8 714 aaPredicted RBP16.73■□□□□ 0.27
XRCC1-206ENST00000597811 ADAM12O43184 909 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 FAM189A1O60320 539 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 PRPF40AO75400 957 aaKnown RBP16.72■□□□□ 0.27
XRCC1-206ENST00000597811 IL18RAPO95256 599 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 SMC2O95347 1197 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 PAPLNO95428 1278 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 FGFR3P22607 806 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 RPL9P32969 192 aaKnown RBP16.72■□□□□ 0.27
XRCC1-206ENST00000597811 MCM4P33991 863 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 CYP2J2P51589 502 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
XRCC1-206ENST00000597811 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
XRCC1-206ENST00000597811 BMP8AQ7Z5Y6 402 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 PBXIP1Q96AQ6 731 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 FAM122AQ96E09 287 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 MFSD14AQ96MC6 490 aa16.72■□□□□ 0.27
XRCC1-206ENST00000597811 RHOBTB2Q9BYZ6 727 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms