RNA–Protein interactions for RNA: ENST00000591620.1

TREM1-207, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 2,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-207ENST00000591620 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 SLC16A3O15427 465 aaKnown RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 CST3P01034 146 aaPredicted RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 EPB41P11171 864 aaKnown RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 GCLMP48507 274 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 MCCD1P59942 119 aaPredicted RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 PLCB3Q01970 1234 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 NCAPHQ15003 741 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 TRAPPC11Q7Z392 1133 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 NT5DC4Q86YG4 428 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 BEST2Q8NFU1 509 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 TMEM169Q96HH4 297 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 CEP63Q96MT8 703 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 HSD3B7Q9H2F3 369 aa11.31□□□□□ -0.6
TREM1-207ENST00000591620 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
TREM1-207ENST00000591620 TMEM189-UBE2V1I3L0A0 370 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 VNN1O95497 513 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 C4BPAP04003 597 aaKnown RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 RB1P06400 928 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 PPM1AP35813 382 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 TIGD5Q53EQ6 642 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 DCAF17Q5H9S7 520 aaPredicted RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 C15orf39Q6ZRI6 1047 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 FILIP1Q7Z7B0 1213 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 GAS2L3Q86XJ1 694 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 SLC35C1Q96A29 364 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 UROC1Q96N76 676 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 DACH1Q9UI36 760 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 AGAP1Q9UPQ3 857 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 KRT19P08727 400 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 CCDC192P0DO97 292 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 RPL9P32969 192 aaKnown RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
TREM1-207ENST00000591620 LILRA4P59901 499 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 SURF1Q15526 300 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 CBWD6Q4V339 395 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 CBWD3Q5JTY5 395 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 RTP2Q5QGT7 225 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 CBWD5Q5RIA9 395 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 DCLRE1AQ6PJP8 1040 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 DHX40Q8IX18 779 aaKnown RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 VPS52Q8N1B4 723 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 ANKRD36BP1Q96IX9 119 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 TSPAN18Q96SJ8 248 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 CDX2Q99626 313 aaPredicted RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 COLEC11Q9BWP8 271 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 ZBP1Q9H171 429 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
TREM1-207ENST00000591620 MTMR10Q9NXD2 777 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 ARMCX3Q9UH62 379 aaPredicted RBP11.3□□□□□ -0.6
TREM1-207ENST00000591620 NFE2L3Q9Y4A8 694 aa11.3□□□□□ -0.6
TREM1-207ENST00000591620 XPOTO43592 962 aaKnown RBP11.29□□□□□ -0.6
TREM1-207ENST00000591620 TADA2AO75478 443 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 KRT13P13646 458 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 TKTP29401 623 aaKnown RBP11.29□□□□□ -0.6
TREM1-207ENST00000591620 MARSP56192 900 aaKnown RBP11.29□□□□□ -0.6
TREM1-207ENST00000591620 ZACNQ401N2 412 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 FAM171A1Q5VUB5 890 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 ADGRD2Q7Z7M1 963 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 AOPEPQ8N6M6 819 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 ENOX1Q8TC92 643 aaKnown RBP11.29□□□□□ -0.6
TREM1-207ENST00000591620 CACTINQ8WUQ7 758 aaKnown RBP11.29□□□□□ -0.6
TREM1-207ENST00000591620 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
TREM1-207ENST00000591620 XYLT2Q9H1B5 865 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 TIMM13Q9Y5L4 95 aaPredicted RBP11.29□□□□□ -0.6
TREM1-207ENST00000591620 PTPRDP23468 1912 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 C5orf42Q9H799 3197 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 DOCK6Q96HP0 2047 aa11.29□□□□□ -0.6
TREM1-207ENST00000591620 HIDE1A8MVS5 230 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 LETM1O95202 739 aaPredicted RBP11.28□□□□□ -0.6
TREM1-207ENST00000591620 TNNC2P02585 160 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 MYL6P60660 151 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 BIRC3Q13489 604 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
TREM1-207ENST00000591620 FRMD5Q7Z6J6 570 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 TAS1R2Q8TE23 839 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 SEMA4DQ92854 862 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 PI4K2AQ9BTU6 479 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 TLR9Q9NR96 1032 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 FANCLQ9NW38 375 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 NUB1Q9Y5A7 615 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 C2CD2LO14523 706 aa11.28□□□□□ -0.6
TREM1-207ENST00000591620 IKBKBO14920 756 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms