RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-216	ENST00000590887	MTF1	Q14872	753 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	TRIM71	Q2Q1W2	868 aa	Known RBP	13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	ASTE1	Q2TB18	679 aa	Predicted RBP	13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	CCDC122	Q5T0U0	273 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	ZNF618	Q5T7W0	954 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	REXO1L1P	Q8IX06	675 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	EFCAB13	Q8IY85	973 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	RNF10	Q8N5U6	811 aa	Known RBP	13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	LRRC52	Q8N7C0	313 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	APBB2	Q92870	758 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	TATDN2	Q93075	761 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	C16orf45	Q96MC5	204 aa	Predicted RBP	13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	DESI2	Q9BSY9	194 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	TMEM106C	Q9BVX2	250 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	APOL6	Q9BWW8	343 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	PDCL3	Q9H2J4	239 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	ADAMTS1	Q9UHI8	967 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	PADI3	Q9ULW8	664 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	AGAP1	Q9UPQ3	857 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	PCDHB4	Q9Y5E5	795 aa		13.93	□□□□□ -0.18
PTBP1-216	ENST00000590887	PITPNM1	O00562	1244 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	MED7	O43513	233 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	CST3	P01034	146 aa	Predicted RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	ITGB3	P05106	788 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	H2AFZ	P0C0S5	128 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	GHR	P10912	638 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	COL6A1	P12109	1028 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	GZMA	P12544	262 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	MYL6	P60660	151 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	ETF1	P62495	437 aa	Known RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	MTFR1	Q15390	333 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	NAB2	Q15742	525 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	XKR4	Q5GH76	650 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	UBXN11	Q5T124	520 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	C1orf53	Q5VUE5	145 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	ALKBH5	Q6P6C2	394 aa	Known RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	ALKAL1	Q6UXT8	129 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	TRIM72	Q6ZMU5	477 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	NYAP1	Q6ZVC0	841 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	H2AFV	Q71UI9	128 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	MRPL10	Q7Z7H8	261 aa	Known RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	ACRBP	Q8NEB7	543 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	UBE2Q2	Q8WVN8	375 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	RSPH1	Q8WYR4	309 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	ARMC5	Q96C12	935 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	HPDL	Q96IR7	371 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	KREMEN1	Q96MU8	473 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	TOX2	Q96NM4	488 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	ALS2CR12	Q96Q35	445 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	PI4K2A	Q9BTU6	479 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	CRISPLD2	Q9H0B8	497 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	TRPV6	Q9H1D0	765 aa		13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	SEPT11	Q9NVA2	429 aa	Known RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	MKI67	P46013	3256 aa	Known RBP	13.92	□□□□□ -0.18
PTBP1-216	ENST00000590887	PTPRJ	Q12913	1337 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887		A0A0U1RQF3	1178 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	ARHGEF37	A1IGU5	675 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	PJA2	O43164	708 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	EOMES	O95936	686 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	PLEK	P08567	350 aa	Predicted RBP	13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	FAM163B	P0C2L3	166 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	CD52	P31358	61 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	WNT7B	P56706	349 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	GNG11	P61952	73 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	GFPT1	Q06210	699 aa	Predicted RBP	13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	TUBB2A	Q13885	445 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	LPIN1	Q14693	890 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	WDR72	Q3MJ13	1102 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	LRRC8D	Q7L1W4	858 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	FAM126B	Q8IXS8	530 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	TMEM192	Q8IY95	271 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	C1orf127	Q8N9H9	656 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	U2AF1L4	Q8WU68	220 aa	Known RBP	13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	ZNF333	Q96JL9	665 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	TUBB2B	Q9BVA1	445 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	GPR88	Q9GZN0	384 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	NXF3	Q9H4D5	531 aa	Known RBP	13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	LZTFL1	Q9NQ48	299 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	NAGPA	Q9UK23	515 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	KIAA1257	Q9ULG3	409 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	CNTN6	Q9UQ52	1028 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	CEP83	Q9Y592	693 aa		13.91	□□□□□ -0.18
PTBP1-216	ENST00000590887	SMIM28	A0A1B0GU29	152 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	BTNL10	A8MVZ5	291 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	CYP26A1	O43174	497 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	TACC1	O75410	805 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	TH	P07101	528 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	CYP11B1	P15538	503 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	AKAP5	P24588	427 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	POLR2B	P30876	1174 aa	Known RBP	13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	CASQ1	P31415	396 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	NAP1L1	P55209	391 aa	Known RBP	13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	CDR2	Q01850	454 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	ZBTB6	Q15916	424 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	SV2C	Q496J9	727 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	SLC39A5	Q6ZMH5	540 aa		13.9	□□□□□ -0.18
PTBP1-216	ENST00000590887	ANKRD33	Q7Z3H0	272 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms