RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 DCBLD1Q8N8Z6 715 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 CCDC150Q8NCX0 1101 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 CASKIN2Q8WXE0 1202 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 RUBCNQ92622 972 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 CNPPD1Q9BV87 410 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 STK31Q9BXU1 1019 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 UNC45AQ9H3U1 944 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
VMP1-208ENST00000588617 ZDHHC8Q9ULC8 765 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 CLCA1A8K7I4 914 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 ZNF500O60304 480 aaPredicted RBP8.93□□□□□ -0.98
VMP1-208ENST00000588617 IL2RBP14784 551 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 RXRGP48443 463 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 KCNQ1P51787 676 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 YBX1P67809 324 aaKnown RBP8.93□□□□□ -0.98
VMP1-208ENST00000588617 CREMQ03060 361 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 ATP2B3Q16720 1220 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 PRSS36Q5K4E3 855 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 MPP5Q8N3R9 675 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 LILRA3Q8N6C8 439 aaPredicted RBP8.93□□□□□ -0.98
VMP1-208ENST00000588617 SLC30A5Q8TAD4 765 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 FAM71BQ8TC56 605 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 STYXQ8WUJ0 223 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 GFM2Q969S9 779 aaKnown RBP8.93□□□□□ -0.98
VMP1-208ENST00000588617 GDF15Q99988 308 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.93□□□□□ -0.98
VMP1-208ENST00000588617 ING3Q9NXR8 418 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 GGA3Q9NZ52 723 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 ZNF212Q9UDV6 495 aa8.93□□□□□ -0.98
VMP1-208ENST00000588617 ANGEL1Q9UNK9 670 aaKnown RBP8.93□□□□□ -0.98
VMP1-208ENST00000588617 PYCARD-AS1I3L0S3 204 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 PIP5K1BO14986 540 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 CD4P01730 458 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 RNASE1P07998 156 aaKnown RBP8.92□□□□□ -0.98
VMP1-208ENST00000588617 GNAI3P08754 354 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
VMP1-208ENST00000588617 MC3RP41968 323 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 ITGA1P56199 1179 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 GNAI1P63096 354 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 ADAM9Q13443 819 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 CCDC93Q567U6 631 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 LMBRD2Q68DH5 695 aaPredicted RBP8.92□□□□□ -0.98
VMP1-208ENST00000588617 CLEC14AQ86T13 490 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 WRNIP1Q96S55 665 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 MAGEB5Q9BZ81 275 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 C11orf54Q9H0W9 315 aaPredicted RBP8.92□□□□□ -0.98
VMP1-208ENST00000588617 SLC6A17Q9H1V8 727 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 CHST8Q9H2A9 424 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 RASSF1Q9NS23 344 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 IGSF9Q9P2J2 1179 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 RABGAP1Q9Y3P9 1069 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 PAXBP1Q9Y5B6 917 aa8.92□□□□□ -0.98
VMP1-208ENST00000588617 ITIH6Q6UXX5 1313 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 GRM6O15303 877 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 TNFRSF6BO95407 300 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 CKMT1AP12532 417 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 FOXO4P98177 505 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 RTP5Q14D33 572 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 EIF4HQ15056 248 aaKnown RBP8.91□□□□□ -0.98
VMP1-208ENST00000588617 FBXO47Q5MNV8 452 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 OLFML2BQ68BL8 750 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 SULT6B1Q6IMI4 303 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 BORAQ6PGQ7 559 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 MOGAT3Q86VF5 341 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 ESX1Q8N693 406 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 GLIS1Q8NBF1 620 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 SMARCC2Q8TAQ2 1214 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 IPCEF1Q8WWN9 437 aaPredicted RBP8.91□□□□□ -0.98
VMP1-208ENST00000588617 ASB12Q8WXK4 309 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.91□□□□□ -0.98
VMP1-208ENST00000588617 PCDH18Q9HCL0 1135 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 A1CFQ9NQ94 594 aaKnown RBP8.91□□□□□ -0.98
VMP1-208ENST00000588617 MOCS1Q9NZB8 636 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 VWA7Q9Y334 891 aa8.91□□□□□ -0.98
VMP1-208ENST00000588617 TEX33O43247 280 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 SBK3P0C264 359 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 IL1R1P14778 569 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 GYPEP15421 78 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 POLD1P28340 1107 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 ELF1P32519 619 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 DUSP2Q05923 314 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 PDE1CQ14123 709 aaPredicted RBP8.9□□□□□ -0.98
VMP1-208ENST00000588617 PABPC1LQ4VXU2 614 aaKnown RBP8.9□□□□□ -0.98
VMP1-208ENST00000588617 PRAMEF14Q5SWL7 426 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 ANKRD45Q5TZF3 282 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 VPS53Q5VIR6 699 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 MZT2BQ6NZ67 158 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 PLXDC1Q8IUK5 500 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 RTKN2Q8IZC4 609 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 PLA2G15Q8NCC3 412 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 MDM1Q8TC05 714 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 HDAC2Q92769 488 aaKnown RBP8.9□□□□□ -0.98
VMP1-208ENST00000588617 BRD9Q9H8M2 597 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 NECTIN3Q9NQS3 549 aa8.9□□□□□ -0.98
VMP1-208ENST00000588617 KAT6BQ8WYB5 2073 aa8.9□□□□□ -0.99
VMP1-208ENST00000588617 MBD3L4A6NDZ8 208 aaPredicted RBP8.89□□□□□ -0.99
VMP1-208ENST00000588617 MBD3L3A6NE82 208 aaPredicted RBP8.89□□□□□ -0.99
VMP1-208ENST00000588617 TMEM233B4DJY2 109 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 WNT10BO00744 389 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms