RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 EDRF1Q3B7T1 1238 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 RTP2Q5QGT7 225 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 CSGALNACT2Q8N6G5 542 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 TMEM174Q8WUU8 243 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 NELFBQ8WX92 580 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 TTPALQ9BTX7 342 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 PRDM6Q9NQX0 595 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 CHST7Q9NS84 486 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 INTS13Q9NVM9 706 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 ATG2AQ2TAZ0 1938 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 AKAP3O75969 853 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 TNNC2P02585 160 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 TKTP29401 623 aaKnown RBP23.18■■□□□ 1.3
RETREG3-202ENST00000585726 POLR2BP30876 1174 aaKnown RBP23.18■■□□□ 1.3
RETREG3-202ENST00000585726 STX17P56962 302 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 DSG1Q02413 1049 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 DUOXA2Q1HG44 320 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 KIAA0319Q5VV43 1072 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 SCARA3Q6AZY7 606 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 PRSS55Q6UWB4 352 aaPredicted RBP23.18■■□□□ 1.3
RETREG3-202ENST00000585726 WDR49Q8IV35 697 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 C1orf127Q8N9H9 656 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 PLEKHO2Q8TD55 490 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 CGRRF1Q99675 332 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 AGAP1Q9UPQ3 857 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 SSX2IPQ9Y2D8 614 aa23.18■■□□□ 1.3
RETREG3-202ENST00000585726 ANO9A1A5B4 782 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 PIRO00625 290 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 CETN3O15182 167 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 LINC01565O15544 149 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 LRRC63Q05C16 580 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 DUSP6Q16828 381 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 LLGL2Q6P1M3 1020 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 DSTYKQ6XUX3 929 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.17■■□□□ 1.3
RETREG3-202ENST00000585726 GLYCTKQ8IVS8 523 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 FAM186BQ8IYM0 893 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 EMILIN2Q9BXX0 1053 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 CLDND1Q9NY35 253 aa23.17■■□□□ 1.3
RETREG3-202ENST00000585726 R3HCC1Q9Y3T6 440 aaKnown RBP23.17■■□□□ 1.3
RETREG3-202ENST00000585726 LRRIQ3A6PVS8 624 aaPredicted RBP23.16■■□□□ 1.3
RETREG3-202ENST00000585726 CNPP09543 421 aaKnown RBP23.16■■□□□ 1.3
RETREG3-202ENST00000585726 RPL17P18621 184 aaKnown RBP23.16■■□□□ 1.3
RETREG3-202ENST00000585726 PSMC2P35998 433 aaKnown RBP23.16■■□□□ 1.3
RETREG3-202ENST00000585726 DLG4P78352 724 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 PAK1Q13153 545 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 PARD3BQ8TEW8 1205 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 ZNF516Q92618 1163 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 SUSD3Q96L08 255 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 KLHL5Q96PQ7 755 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 GZF1Q9H116 711 aaPredicted RBP23.16■■□□□ 1.3
RETREG3-202ENST00000585726 ITGA11Q9UKX5 1188 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 IRAK3Q9Y616 596 aa23.16■■□□□ 1.3
RETREG3-202ENST00000585726 SPTLC1O15269 473 aa23.15■■□□□ 1.3
RETREG3-202ENST00000585726 LILRB3O75022 631 aa23.15■■□□□ 1.3
RETREG3-202ENST00000585726 CLASP2O75122 1294 aaKnown RBP23.15■■□□□ 1.3
RETREG3-202ENST00000585726 KRT13P13646 458 aa23.15■■□□□ 1.3
RETREG3-202ENST00000585726 FGFR3P22607 806 aa23.15■■□□□ 1.3
RETREG3-202ENST00000585726 KLRC2P26717 231 aa23.15■■□□□ 1.3
RETREG3-202ENST00000585726 LILRA4P59901 499 aa23.15■■□□□ 1.3
RETREG3-202ENST00000585726 RBP5P82980 135 aa23.15■■□□□ 1.3
RETREG3-202ENST00000585726 RBM10P98175 930 aaKnown RBP23.15■■□□□ 1.3
RETREG3-202ENST00000585726 FKBP3Q00688 224 aaKnown RBP23.15■■□□□ 1.3
RETREG3-202ENST00000585726 TIMM13Q9Y5L4 95 aaPredicted RBP23.15■■□□□ 1.3
RETREG3-202ENST00000585726 BICDL2A1A5D9 508 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 TEX28O15482 410 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 EPB41P11171 864 aaKnown RBP23.14■■□□□ 1.29
RETREG3-202ENST00000585726 TAF6P49848 677 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 VAMP7P51809 220 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 NLRP12P59046 1061 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 BFSP1Q12934 665 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 PSMD5Q16401 504 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 CCDC183Q5T5S1 534 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 TRAPPC11Q7Z392 1133 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 LNX1Q8TBB1 728 aaPredicted RBP23.14■■□□□ 1.29
RETREG3-202ENST00000585726 SENP8Q96LD8 212 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 ZNF560Q96MR9 790 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 CDCA3Q99618 268 aaPredicted RBP23.14■■□□□ 1.29
RETREG3-202ENST00000585726 DUSP9Q99956 384 aaKnown RBP23.14■■□□□ 1.29
RETREG3-202ENST00000585726 SIX4Q9UIU6 781 aa23.14■■□□□ 1.29
RETREG3-202ENST00000585726 MAPK13O15264 365 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 PHACTR2O75167 634 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 TRIM49P0CI25 452 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 TRIM49CP0CI26 452 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 BIRC3Q13489 604 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 SV2CQ496J9 727 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 TTI2Q6NXR4 508 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 INTS8Q75QN2 995 aaKnown RBP23.13■■□□□ 1.29
RETREG3-202ENST00000585726 EFHBQ8N7U6 833 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 MLKLQ8NB16 471 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 TMC2Q8TDI7 906 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 PIK3R5Q8WYR1 880 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 HLA-CQ95604 372 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 MMRN2Q9H8L6 949 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 RXFP1Q9HBX9 757 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.13■■□□□ 1.29
RETREG3-202ENST00000585726 PCDHB8Q9UN66 801 aa23.13■■□□□ 1.29
RETREG3-202ENST00000585726 MYO7AQ13402 2215 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 M0QZQ0 153 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms