RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TUBGCP4Q9UGJ1 667 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 ADAM28Q9UKQ2 775 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 ITGA11Q9UKX5 1188 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 SYCE3A1L190 88 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 AKAP3O75969 853 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 URODP06132 367 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 ADRB2P07550 413 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 TPM2P07951 284 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 KCNA5P22460 613 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 PNPLA4P41247 253 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 CASP4P49662 377 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 RBP5P82980 135 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 TYRO3Q06418 890 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 SPATA1Q5VX52 437 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 RBM43Q6ZSC3 357 aaKnown RBP14.97□□□□□ -0.01
TRAF4-215ENST00000584944 TMC7Q7Z402 723 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 SLC39A11Q8N1S5 342 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 TMEM174Q8WUU8 243 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 MFSD14AQ96MC6 490 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 ZNF560Q96MR9 790 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 LRFN3Q9BTN0 628 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
TRAF4-215ENST00000584944 IMPG2Q9BZV3 1241 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 MTMR12Q9C0I1 747 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 LMAN2LQ9H0V9 348 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 MMRN2Q9H8L6 949 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 TLR9Q9NR96 1032 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 SSX2IPQ9Y2D8 614 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 NLRC5Q86WI3 1866 aa14.97□□□□□ -0.01
TRAF4-215ENST00000584944 ITGB1P05556 798 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 PAX3P23760 479 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 PMS1P54277 932 aaKnown RBP14.96□□□□□ -0.01
TRAF4-215ENST00000584944 PLCB3Q01970 1234 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 CETN1Q12798 172 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 UPP1Q16831 310 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 FNDC1Q4ZHG4 1894 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-215ENST00000584944 LMBRD2Q68DH5 695 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-215ENST00000584944 TTI2Q6NXR4 508 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 FOXR2Q6PJQ5 311 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 DSTYKQ6XUX3 929 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 DDX53Q86TM3 631 aaKnown RBP14.96□□□□□ -0.01
TRAF4-215ENST00000584944 CEP57Q86XR8 500 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 VPS52Q8N1B4 723 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 ANKRD20A12PQ8NF67 263 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 TMC2Q8TDI7 906 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 POF1BQ8WVV4 589 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 TCF25Q9BQ70 676 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-215ENST00000584944 CXCL16Q9H2A7 254 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 INTS13Q9NVM9 706 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 AGAP1Q9UPQ3 857 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 LZTS1Q9Y250 596 aa14.96□□□□□ -0.01
TRAF4-215ENST00000584944 BECN2A8MW95 431 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 PES1O00541 588 aaKnown RBP14.95□□□□□ -0.02
TRAF4-215ENST00000584944 IKBKBO14920 756 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 KIF4AO95239 1232 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 ITGB3P05106 788 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 LINC00271P0C7V0 271 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 POLR2BP30876 1174 aaKnown RBP14.95□□□□□ -0.02
TRAF4-215ENST00000584944 PLA2G5P39877 138 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 GUCY2FP51841 1108 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 TPM4P67936 248 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 SOX4Q06945 474 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-215ENST00000584944 BFSP1Q12934 665 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 COL19A1Q14993 1142 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 USP41Q3LFD5 358 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 SV2CQ496J9 727 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 TIGD5Q53EQ6 642 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 TMEM31Q5JXX7 168 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 FAM171A1Q5VUB5 890 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 PDE12Q6L8Q7 609 aaKnown RBP14.95□□□□□ -0.02
TRAF4-215ENST00000584944 FUT10Q6P4F1 479 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 PDXDC1Q6P996 788 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 FILIP1Q7Z7B0 1213 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 POP1Q99575 1024 aaKnown RBP14.95□□□□□ -0.02
TRAF4-215ENST00000584944 PAAF1Q9BRP4 392 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 C11orf16Q9NQ32 467 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 MRPL17Q9NRX2 175 aaKnown RBP14.95□□□□□ -0.02
TRAF4-215ENST00000584944 CACNG4Q9UBN1 327 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 RALGAPA2Q2PPJ7 1873 aa14.95□□□□□ -0.02
TRAF4-215ENST00000584944 TDRD15B5MCY1 1934 aaKnown RBP14.94□□□□□ -0.02
TRAF4-215ENST00000584944 CITO14578 2027 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 GRXCR2A6NFK2 248 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 C2CD2LO14523 706 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 GRM6O15303 877 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 B4GALT3O60512 393 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 GPR37L1O60883 481 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 IL9P15248 144 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 LRPAP1P30533 357 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 PIK3CAP42336 1068 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 MTIF2P46199 727 aaKnown RBP14.94□□□□□ -0.02
TRAF4-215ENST00000584944 GLUD2P49448 558 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 TAF6P49848 677 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 CREMQ03060 361 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 SMC1AQ14683 1233 aaKnown RBP14.94□□□□□ -0.02
TRAF4-215ENST00000584944 NAB2Q15742 525 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 ZBTB6Q15916 424 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 ZSCAN23Q3MJ62 389 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 ANO6Q4KMQ2 910 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms