RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ANKFY1Q9P2R3 1169 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 RCOR1Q9UKL0 485 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
SKA2-209ENST00000583976 MRPS23Q9Y3D9 190 aaKnown RBP17.11■□□□□ 0.33
SKA2-209ENST00000583976 BACE2Q9Y5Z0 518 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 MYH11P35749 1972 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 SLC16A4O15374 487 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
SKA2-209ENST00000583976 PROZP22891 400 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 ARPP19P56211 112 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 TCEAL4Q96EI5 215 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 MCRS1Q96EZ8 462 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 CALML4Q96GE6 196 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 ZBTB45Q96K62 511 aaPredicted RBP17.1■□□□□ 0.33
SKA2-209ENST00000583976 DDX23Q9BUQ8 820 aaKnown RBP17.1■□□□□ 0.33
SKA2-209ENST00000583976 GDPD2Q9HCC8 539 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 KMT5AQ9NQR1 393 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 DNM3Q9UQ16 869 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 MORC2Q9Y6X9 1032 aaPredicted RBP17.1■□□□□ 0.33
SKA2-209ENST00000583976 TSC2P49815 1807 aa17.1■□□□□ 0.33
SKA2-209ENST00000583976 CEP250Q9BV73 2442 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 KANSL1LA0AUZ9 987 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 SFI1A8K8P3 1242 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 CUTAO60888 179 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 SEC24AO95486 1093 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 FCARP24071 287 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 ID4P47928 161 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 YARSP54577 528 aaKnown RBP17.09■□□□□ 0.33
SKA2-209ENST00000583976 HYIQ5T013 277 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 SLC8B1Q6J4K2 584 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 MPZL3Q6UWV2 235 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 ALKAL1Q6UXT8 129 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 TPRG1Q6ZUI0 275 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 KIAA2013Q8IYS2 634 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 LEO1Q8WVC0 666 aaPredicted RBP17.09■□□□□ 0.33
SKA2-209ENST00000583976 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 LTB4R2Q9NPC1 389 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 TOPORSQ9NS56 1045 aaPredicted RBP17.09■□□□□ 0.33
SKA2-209ENST00000583976 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
SKA2-209ENST00000583976 CNTN3Q9P232 1028 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 KCNH3Q9ULD8 1083 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 NCANO14594 1321 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 TICRRQ7Z2Z1 1910 aa17.09■□□□□ 0.33
SKA2-209ENST00000583976 PRRG1O14668 218 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 PLCG1P19174 1290 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
SKA2-209ENST00000583976 TXLNAP40222 546 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 CCR2P41597 374 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 GRM2Q14416 872 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 SLC44A4Q53GD3 710 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 PRSS36Q5K4E3 855 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 DCLK2Q8N568 766 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 HINFPQ9BQA5 517 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 CORO1BQ9BR76 489 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 CCSER1Q9C0I3 900 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 TMEM134Q9H6X4 195 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 CCDC39Q9UFE4 941 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 INSL5Q9Y5Q6 135 aa17.08■□□□□ 0.32
SKA2-209ENST00000583976 ARHGEF37A1IGU5 675 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 SHISA7A6NL88 538 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 TBC1D4O60343 1298 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 LRG1P02750 347 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 CXCL8P10145 99 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 MCF2P10911 925 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 KCNE1P15382 129 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
SKA2-209ENST00000583976 PRKCQQ04759 706 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 SPAG1Q07617 926 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 DHX8Q14562 1220 aaKnown RBP17.07■□□□□ 0.32
SKA2-209ENST00000583976 UVSSAQ2YD98 709 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 TMEM119Q4V9L6 283 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 TANGO2Q6ICL3 276 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 SHC4Q6S5L8 630 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 APBB1IPQ7Z5R6 666 aaPredicted RBP17.07■□□□□ 0.32
SKA2-209ENST00000583976 LRRC15Q8TF66 581 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 SHDQ96IW2 340 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 DRC1Q96MC2 740 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 ACAP3Q96P50 834 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 CYP4F11Q9HBI6 524 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 HEBP1Q9NRV9 189 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 NUB1Q9Y5A7 615 aa17.07■□□□□ 0.32
SKA2-209ENST00000583976 NPHP3-ACAD11A0A0J9YXS1 232 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 FAM170BA6NMN3 283 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 SYN3O14994 580 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 ECI2O75521 394 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 ABLIM3O94929 683 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 MCM4P33991 863 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 NOLC1Q14978 699 aaKnown RBP eCLIP17.06■□□□□ 0.32
SKA2-209ENST00000583976 ZC3H14Q6PJT7 736 aaKnown RBP17.06■□□□□ 0.32
SKA2-209ENST00000583976 TSSK4Q6SA08 328 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 HS6ST3Q8IZP7 471 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms