RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	ENTPD3	O75355	529 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	GNAI2	P04899	355 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	MYL1	P05976	194 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	CCL5	P13501	91 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	PNLIP	P16233	465 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	LPO	P22079	712 aa	Predicted RBP	5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	ENPP1	P22413	925 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	HMGCS2	P54868	508 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	RHBDL3	P58872	404 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	ATF7IP	Q6VMQ6	1270 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	ADGRA1	Q86SQ6	560 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	VSIG10L	Q86VR7	867 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	DTX1	Q86Y01	620 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	MAPKAPK5	Q8IW41	473 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	FTSJ3	Q8IY81	847 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	TEX11	Q8IYF3	940 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	LILRA2	Q8N149	483 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	SPATA5	Q8NB90	893 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	PMM1	Q92871	262 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	GCC1	Q96CN9	775 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	AIFM3	Q96NN9	605 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	NOL10	Q9BSC4	688 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	IDI2	Q9BXS1	227 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	ZCCHC17	Q9NP64	241 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	PRDM7	Q9NQW5	492 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	C19orf73	Q9NVV2	129 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	OBP2A	Q9NY56	170 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	ZNF112	Q9UJU3	913 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	PALD1	Q9ULE6	856 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	FLT1	P17948	1338 aa		5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	PDS5A	Q29RF7	1337 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-213	ENST00000581523	MYH8	P13535	1937 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	XPOT	O43592	962 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	FARP2	O94887	1054 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	MED26	O95402	600 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	DBH	P09172	617 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	TMEM253	P0C7T8	217 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	SPINK2	P20155	84 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	ARL4A	P40617	200 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	FLT3LG	P49771	235 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	FXR1	P51114	621 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	SPP2	Q13103	211 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	MTX1	Q13505	466 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	RRP1B	Q14684	758 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	TIGD5	Q53EQ6	642 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	NAA16	Q6N069	864 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	NFXL1	Q6ZNB6	911 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	MILR1	Q7Z6M3	343 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	CXorf67	Q86X51	503 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	PHYKPL	Q8IUZ5	450 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	MIGA1	Q8NAN2	632 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	DIS3L	Q8TF46	1054 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	TGFBRAP1	Q8WUH2	860 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	ASB15	Q8WXK1	588 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	JADE3	Q92613	823 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	NSUN4	Q96CB9	384 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	CLIP3	Q96DZ5	547 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	PEX11G	Q96HA9	241 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	TEKT5	Q96M29	485 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	WNT8A	Q9H1J5	351 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	DNAJC18	Q9H819	358 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	TNFRSF12A	Q9NP84	129 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	PIH1D3	Q9NQM4	214 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	PAK6	Q9NQU5	681 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	NUDT5	Q9UKK9	219 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	ZBTB21	Q9ULJ3	1066 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	AGTPBP1	Q9UPW5	1226 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	HDAC5	Q9UQL6	1122 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	INVS	Q9Y283	1065 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	SIT1	Q9Y3P8	196 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	AFG3L2	Q9Y4W6	797 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	FPGT-TNNI3K	V9GXZ4	949 aa		5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	COL2A1	P02458	1487 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-213	ENST00000581523	GPR75-ASB3	A0A0A6YYF3	556 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	PRAMEF25	A6NGN4	478 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	VSTM5	A8MXK1	200 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	GOLGA6L22	H0YM25	854 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	CXCL11	O14625	94 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	ERC2	O15083	957 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	CTNND1	O60716	968 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	SURF6	O75683	361 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	IDH1	O75874	414 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	IL33	O95760	270 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	CYBB	P04839	570 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	AGXT	P21549	392 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	AKAP5	P24588	427 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	HOXD10	P28358	340 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	MTNR1B	P49286	362 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	MANF	P55145	182 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	ERVFC1	P60507	584 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	DYNLL1	P63167	89 aa	Known RBP	5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	UBXN2A	P68543	259 aa		5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	IRX3	P78415	501 aa	Predicted RBP	5.16	□□□□□ -1.58
MSI2-213	ENST00000581523	GSTO1	P78417	241 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms