RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 CAGE1Q8TC20 777 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 TAF4BQ92750 862 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 NT5C1BQ96P26 610 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 ACAP3Q96P50 834 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 CCDC94Q9BW85 323 aaPredicted RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 EIF2AQ9BY44 585 aaKnown RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 MTMR12Q9C0I1 747 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 FAM124BQ9H5Z6 455 aaPredicted RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 AGO3Q9H9G7 860 aaKnown RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 NHEJ1Q9H9Q4 299 aaPredicted RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 RPF1Q9H9Y2 349 aaKnown RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 RRAGDQ9NQL2 400 aaPredicted RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 ZNHIT6Q9NWK9 470 aaKnown RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 SIX4Q9UIU6 781 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 PPP2R2CQ9Y2T4 447 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 EPN1Q9Y6I3 576 aaPredicted RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 TTC3P53804 2025 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 GOLGA6L9A6NEM1 432 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 INPPL1O15357 1258 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 CCP110O43303 1012 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 RPS6KA5O75582 802 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 NPTXRO95502 500 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 PLEKP08567 350 aaPredicted RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 NFICP08651 508 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 CCDC175P0C221 793 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 HARSP12081 509 aaKnown RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 CKBP12277 381 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 ACO1P21399 889 aaKnown RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 STAT1P42224 750 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 NCOA4Q13772 614 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 RAPGEF1Q13905 1077 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 ASIC2Q16515 512 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 LMBRD2Q68DH5 695 aaPredicted RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 ANKRD33Q7Z3H0 272 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 MRPL10Q7Z7H8 261 aaKnown RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 C17orf53Q8N3J3 647 aaPredicted RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 C1orf127Q8N9H9 656 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 KAT5Q92993 513 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 FAM84AQ96KN4 292 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 PPP1R13BQ96KQ4 1090 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 DEFB118Q96PH6 123 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 SPAG5Q96R06 1193 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 OSBPL7Q9BZF2 842 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 NXF3Q9H4D5 531 aaKnown RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 APOBEC3GQ9HC16 384 aaKnown RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 ST3GAL5Q9UNP4 418 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 PIN4Q9Y237 131 aaKnown RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 VPS9D1Q9Y2B5 631 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 IPPQ9Y573 584 aa8.58□□□□□ -1.04
KPNB1-210ENST00000580573 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
KPNB1-210ENST00000580573 FNDC1Q4ZHG4 1894 aaPredicted RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 FOXN3O00409 490 aaPredicted RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 GPR182O15218 404 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 PJA2O43164 708 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ZSCAN12O43309 604 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 RECQL4O94761 1208 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 SGPL1O95470 568 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 CST3P01034 146 aaPredicted RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 TBXAS1P24557 533 aaPredicted RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ATICP31939 592 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 CYLC1P35663 651 aaPredicted RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 THPOP40225 353 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ARHGAP25P42331 645 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 PIK3CAP42336 1068 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 RAB27AP51159 221 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 KIF11P52732 1056 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ZNF132P52740 706 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 MFAP3P55082 362 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 OSTNP61366 133 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 NOP14P78316 857 aaKnown RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 PTK2Q05397 1052 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 CUL2Q13617 745 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 TMEM132DQ14C87 1099 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 SLC18A3Q16572 532 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 SGSM1Q2NKQ1 1148 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ZNF618Q5T7W0 954 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 SCARA3Q6AZY7 606 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 JADE1Q6IE81 842 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ZNF571Q7Z3V5 609 aaPredicted RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 SLC30A5Q8TAD4 765 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 U2AF1L4Q8WU68 220 aaKnown RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ANKRD36BP1Q96IX9 119 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ZMAT2Q96NC0 199 aaKnown RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 TOX2Q96NM4 488 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 BCO2Q9BYV7 579 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 RNF208Q9H0X6 261 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 TRPV6Q9H1D0 765 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 UBE2TQ9NPD8 197 aaPredicted RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 C1orf112Q9NSG2 853 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 FAM105AQ9NUU6 356 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 NOCTQ9UK39 431 aaKnown RBP8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ITGA11Q9UKX5 1188 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 PADI3Q9ULW8 664 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms