RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 UBE4BO95155 1302 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 F8W810 466 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 EIF3DO15371 548 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC57-211ENST00000578187 TGM5O43548 720 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 TRAPPC3O43617 180 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 KLRC4O43908 158 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 SPATA31D3P0C874 917 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 KCNE1P15382 129 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 RFX1P22670 979 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 TNFSF9P41273 254 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 MATR3P43243 847 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC57-211ENST00000578187 VCPP55072 806 aaKnown RBP13.9□□□□□ -0.18
CCDC57-211ENST00000578187 KYAT1Q16773 422 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 SEZ6Q53EL9 994 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 GLRA4Q5JXX5 417 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 FAM171A1Q5VUB5 890 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 SLFN12LQ6IEE8 588 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 SPATA31D4Q6ZUB0 917 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 STXBP4Q6ZWJ1 553 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 GLIS3Q8NEA6 775 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 RABGGTAQ92696 567 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 NXPE3Q969Y0 559 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 UROC1Q96N76 676 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 MSTO1Q9BUK6 570 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 IKZF4Q9H2S9 585 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 KCNK12Q9HB15 430 aa13.9□□□□□ -0.18
CCDC57-211ENST00000578187 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC57-211ENST00000578187 C2orf16Q68DN1 1984 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 SMIM28A0A1B0GU29 152 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 TTC26A0AVF1 554 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 RFPL2O75678 378 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 PRPF6O94906 941 aaKnown RBP13.89□□□□□ -0.19
CCDC57-211ENST00000578187 ZNF202O95125 648 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 KIF4AO95239 1232 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 CLTAP09496 248 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 CXCL8P10145 99 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 PSMD5Q16401 504 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 SLC10A6Q3KNW5 377 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 ASTLQ6HA08 431 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-211ENST00000578187 FMR1NBQ8N0W7 255 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-211ENST00000578187 ATOH1Q92858 354 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-211ENST00000578187 ZMAT2Q96NC0 199 aaKnown RBP13.89□□□□□ -0.19
CCDC57-211ENST00000578187 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 TMEM206Q9H813 350 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 PLEKHA5Q9HAU0 1116 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 CACNG4Q9UBN1 327 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 CPSF3Q9UKF6 684 aaKnown RBP13.89□□□□□ -0.19
CCDC57-211ENST00000578187 DUSP12Q9UNI6 340 aa13.89□□□□□ -0.19
CCDC57-211ENST00000578187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 GOLGA6L4A6NEF3 574 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 TMEM189-UBE2V1I3L0A0 370 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 PDGFBP01127 241 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 ADRB2P07550 413 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 ADSSP30520 456 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 HOXD13P35453 343 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 CLCN5P51795 746 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 POU5F1Q01860 360 aaKnown RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 SOX4Q06945 474 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 TCF15Q12870 199 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 POSTNQ15063 836 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 ENOX2Q16206 610 aaKnown RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 BMT2Q1RMZ1 405 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 FLCNQ8NFG4 579 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 ENGASEQ8NFI3 743 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 ZNF507Q8TCN5 953 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 PIK3R5Q8WYR1 880 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 PAAF1Q9BRP4 392 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 SLC38A7Q9NVC3 462 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 EPS15L1Q9UBC2 864 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 ZFP37Q9Y6Q3 630 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-211ENST00000578187 ZNF318Q5VUA4 2279 aa13.88□□□□□ -0.19
CCDC57-211ENST00000578187 TSC2P49815 1807 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 STK25O00506 426 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 XYLBO75191 536 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 ZMYND10O75800 440 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 B3GAT3O94766 335 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC57-211ENST00000578187 RPL17P18621 184 aaKnown RBP13.87□□□□□ -0.19
CCDC57-211ENST00000578187 GARTP22102 1010 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 FAM160A1Q05DH4 1040 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 PPP2R3AQ06190 1150 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 DPYDQ12882 1025 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 SNW1Q13573 536 aaKnown RBP13.87□□□□□ -0.19
CCDC57-211ENST00000578187 KMT5BQ4FZB7 885 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 PPM1LQ5SGD2 360 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 DCLRE1AQ6PJP8 1040 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 GET4Q7L5D6 327 aaPredicted RBP13.87□□□□□ -0.19
CCDC57-211ENST00000578187 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 POMGNT1Q8WZA1 660 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms