RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 RAD51CO43502 376 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 OPA1O60313 960 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 SORBS3O60504 671 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 B4GALT4O60513 344 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CELF2O95319 508 aaKnown RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ASS1P00966 412 aaKnown RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 PGK2P07205 417 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 MMEP08473 750 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CFHP08603 1231 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CLTAP09496 248 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 TXNP10599 105 aaKnown RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 HOXD8P13378 290 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ABCB4P21439 1286 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 COMTP21964 271 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CYP2C19P33261 490 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 USP8P40818 1118 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 SLC1A1P43005 524 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CARSP49589 748 aaKnown RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ACOT2P49753 483 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 GTF2A2P52657 109 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF132P52740 706 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 WNT7BP56706 349 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 SLC7A5Q01650 507 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 GUCY2DQ02846 1103 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ARHGAP1Q07960 439 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 PTP4A2Q12974 167 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CUL2Q13617 745 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 MAPK6Q16659 721 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CYP1B1Q16678 543 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 DUOXA2Q1HG44 320 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 SGSM1Q2NKQ1 1148 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 HSDL1Q3SXM5 330 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 HSP90B2PQ58FF3 399 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ANKRD23Q86SG2 305 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 DNAAF5Q86Y56 855 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 PHF13Q86YI8 300 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 WDR49Q8IV35 697 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CD302Q8IX05 232 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 MCOLN2Q8IZK6 566 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 DEPDC4Q8N2C3 294 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 UBL4BQ8N7F7 174 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 LINC01465Q8N7H1 131 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 FAM174AQ8TBP5 190 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CASKIN2Q8WXE0 1202 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 SPATA33Q96N06 139 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 RUNDC3BQ96NL0 473 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ZSWIM1Q9BR11 485 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 FAM124BQ9H5Z6 455 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 APOBEC3GQ9HC16 384 aaKnown RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 EPB41L5Q9HCM4 733 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 VTA1Q9NP79 307 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 C1orf112Q9NSG2 853 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 RBAKQ9NYW8 714 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ERAP1Q9NZ08 941 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 KIAA1522Q9P206 1035 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CTTNBP2NLQ9P2B4 639 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 LCMT1Q9UIC8 334 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ADAM21Q9UKJ8 722 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 PACSIN2Q9UNF0 486 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-213ENST00000569687 TNFSF13BQ9Y275 285 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 LCTP09848 1927 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 KIAA1217Q5T5P2 1943 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 ZBBXA8MT70 800 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 NOP56O00567 594 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 POLR3GO15318 223 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 HEXIM1O94992 359 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 IL18RAPO95256 599 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 SNAI1O95863 264 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ITGBL1O95965 494 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 GH1P01241 217 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 FGGP02679 453 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 EDN1P05305 212 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PRKCBP05771 671 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 SRGAP2CP0DJJ0 459 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ITGA4P13612 1032 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 KRT5P13647 590 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 GBP1P32455 592 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 HSPA9P38646 679 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PDE6CP51160 858 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 RNASE9P60153 205 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 CDC42EP1Q00587 391 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 CENPCQ03188 943 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 DRP2Q13474 957 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 NCOA4Q13772 614 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 DHX34Q14147 1143 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 KYAT1Q16773 422 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 CRTC2Q53ET0 693 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 SPDYCQ5MJ68 293 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ZBTB41Q5SVQ8 909 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 DCAF12L1Q5VU92 463 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 TAF3Q5VWG9 929 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 CST9Q5W186 159 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 IQSEC1Q6DN90 963 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PLEKHA7Q6IQ23 1121 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 EFCAB12Q6NXP0 572 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 MPZL3Q6UWV2 235 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 LYPD8Q6UX82 237 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ARMCX2Q7L311 632 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 RETREG3Q86VR2 466 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms