RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 NAB2Q15742 525 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 KIAA1841Q6NSI8 718 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 PPP1R21Q6ZMI0 780 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 RNF10Q8N5U6 811 aaKnown RBP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ZSWIM2Q8NEG5 633 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 LRRC4Q9HBW1 653 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 A0A0B4J269 797 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 KRIT1O00522 736 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ZC3H11AO75152 810 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 HADHQ16836 314 aaKnown RBP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 CD302Q8IX05 232 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 KAT5Q92993 513 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ADGRA3Q8IWK6 1321 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ARHGEF37A1IGU5 675 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 PIK3R2O00459 728 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 MAPK13O15264 365 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 CABYRO75952 493 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 UPP2O95045 317 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 SGO2Q562F6 1265 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 JADE1Q6IE81 842 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 GLB1LQ6UWU2 654 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ZNF571Q7Z3V5 609 aaPredicted RBP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 REXO1L1PQ8IX06 675 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 CELF4Q9BZC1 486 aaKnown RBP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 NAGPAQ9UK23 515 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 SMIM35A0A1B0GVV1 85 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 NCK2O43639 380 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 RTN2O75298 545 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ADORA2BP29275 332 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ORC1Q13415 861 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 DNAAF5Q86Y56 855 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 NME8Q8N427 588 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 TTC39CQ8N584 583 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 APPL2Q8NEU8 664 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 ZBTB41Q5SVQ8 909 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 ASB7Q9H672 318 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 SLC38A7Q9NVC3 462 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 DUSP10Q9Y6W6 482 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 DCDC2CA8MYV0 355 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 ADSSP30520 456 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 HOXD13P35453 343 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 GUCY2FP51841 1108 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 MOGSQ13724 837 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 AMHR2Q16671 573 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 TRIM72Q6ZMU5 477 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 ZNF564Q8TBZ8 553 aaPredicted RBP12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 RFFLQ8WZ73 363 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 DEFB118Q96PH6 123 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 RNF186Q9NXI6 227 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 AIPL1Q9NZN9 384 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 CHORDC1Q9UHD1 332 aaPredicted RBP12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 INHAP05111 366 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 ANXA13P27216 316 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 MRPS6P82932 125 aaKnown RBP12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 CDK17Q00537 523 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 ITGA7Q13683 1181 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 NFIL3Q16649 462 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 PHLDB3Q6NSJ2 640 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 APTXQ7Z2E3 356 aaKnown RBP12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 DMAC2Q9NW81 257 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 FNDC3AQ9Y2H6 1198 aaKnown RBP12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 SCINQ9Y6U3 715 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 CNTRLQ7Z7A1 2325 aa12.93□□□□□ -0.34
TMEM170A-205ENST00000568559 A6NJR5 290 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 BRD2P25440 801 aaKnown RBP12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 AXLP30530 894 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 SLC20A1Q8WUM9 679 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 SENP6Q9GZR1 1112 aaPredicted RBP12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 LACRTQ9GZZ8 138 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 ZBBXA8MT70 800 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 RECQL4O94761 1208 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 MMEP08473 750 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 CYP11B1P15538 503 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 MAP2K2P36507 400 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 RAP1GAPP47736 663 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 CACNB2Q08289 660 aaPredicted RBP12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 BFSP2Q13515 415 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 CCDC105Q8IYK2 499 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 TRIB2Q92519 343 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 RPGRIP1Q96KN7 1286 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 MFSD14AQ96MC6 490 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 FAM49BQ9NUQ9 324 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 DAPK3O43293 454 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 CALB1P05937 261 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 CRYBB1P53674 252 aaPredicted RBP12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 ADCY1Q08828 1119 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 SIX6OS1Q8N1H7 587 aa12.92□□□□□ -0.34
TMEM170A-205ENST00000568559 THEM5Q8N1Q8 247 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms