RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 CTNND2Q9UQB3 1225 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 MYO15AQ9UKN7 3530 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 IKBKBO14920 756 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 MEFVO15553 781 aaPredicted RBP18.08■□□□□ 0.48
CLN6-208ENST00000567060 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
CLN6-208ENST00000567060 GALTP07902 379 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 KRT13P13646 458 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 LRPAP1P30533 357 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 AFF1P51825 1210 aaKnown RBP18.08■□□□□ 0.48
CLN6-208ENST00000567060 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.48
CLN6-208ENST00000567060 BCAR1P56945 870 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 CLDN10P78369 228 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 ADAM15Q13444 863 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 IER5LQ5T953 404 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 SPATA1Q5VX52 437 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 FAM186BQ8IYM0 893 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 CSGALNACT2Q8N6G5 542 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 COLGALT1Q8NBJ5 622 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 EDAQ92838 391 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 ZMAT2Q96NC0 199 aaKnown RBP18.08■□□□□ 0.48
CLN6-208ENST00000567060 COLEC11Q9BWP8 271 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 LZTS1Q9Y250 596 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 FAN1Q9Y2M0 1017 aa18.08■□□□□ 0.48
CLN6-208ENST00000567060 STX10O60499 249 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 AKAP3O75969 853 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 DDHD2O94830 711 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 MARSP56192 900 aaKnown RBP18.07■□□□□ 0.48
CLN6-208ENST00000567060 PLCB3Q01970 1234 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 KRT17Q04695 432 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 TYRO3Q06418 890 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 DUOXA2Q1HG44 320 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 GLRA4Q5JXX5 417 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 JADE1Q6IE81 842 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 FRMD5Q7Z6J6 570 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 ZNF280BQ86YH2 543 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 PRSS33Q8NF86 280 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 ENOX1Q8TC92 643 aaKnown RBP18.07■□□□□ 0.48
CLN6-208ENST00000567060 PARD3BQ8TEW8 1205 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 ANKRD36BP1Q96IX9 119 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 CGRRF1Q99675 332 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 DUSP9Q99956 384 aaKnown RBP18.07■□□□□ 0.48
CLN6-208ENST00000567060 IGFLR1Q9H665 355 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 SPG21Q9NZD8 308 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 PLAGL2Q9UPG8 496 aa18.07■□□□□ 0.48
CLN6-208ENST00000567060 DMDP11532 3685 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 TRIM49BA6NDI0 452 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 DNAJB1P25685 340 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 GTF2H1P32780 548 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 ELAVL2Q12926 359 aaKnown RBP18.06■□□□□ 0.48
CLN6-208ENST00000567060 BFSP1Q12934 665 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 SMAD4Q13485 552 aaKnown RBP18.06■□□□□ 0.48
CLN6-208ENST00000567060 DCLRE1AQ6PJP8 1040 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 BMP8AQ7Z5Y6 402 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 FAM114A1Q8IWE2 563 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 SLC39A11Q8N1S5 342 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 RDH13Q8NBN7 331 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 ZSWIM2Q8NEG5 633 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 TMEM169Q96HH4 297 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 MSLNLQ96KJ4 702 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 POP1Q99575 1024 aaKnown RBP18.06■□□□□ 0.48
CLN6-208ENST00000567060 BPIFA3Q9BQP9 254 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 PDE11AQ9HCR9 933 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 ALG13Q9NP73 1137 aaKnown RBP18.06■□□□□ 0.48
CLN6-208ENST00000567060 INTS13Q9NVM9 706 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 ITGA11Q9UKX5 1188 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 KIAA1671Q9BY89 1806 aa18.06■□□□□ 0.48
CLN6-208ENST00000567060 ARHGEF37A1IGU5 675 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 NRP1O14786 923 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 TNNC2P02585 160 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 NFICP08651 508 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 TMEM191BP0C7N4 346 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 TNNI1P19237 187 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 PNPLA4P41247 253 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 OR1G1P47890 313 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 SLC11A1P49279 550 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 CASP4P49662 377 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 VAMP7P51809 220 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 BMS1Q14692 1282 aaKnown RBP18.05■□□□□ 0.48
CLN6-208ENST00000567060 UPP1Q16831 310 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 TPD52L1Q16890 204 aaPredicted RBP18.05■□□□□ 0.48
CLN6-208ENST00000567060 ZSCAN23Q3MJ62 389 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 GPR65Q8IYL9 337 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 BORCS6Q96GS4 357 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 IGSF21Q96ID5 467 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 THAP9Q9H5L6 903 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 CLEC1BQ9P126 229 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 ARMCX3Q9UH62 379 aaPredicted RBP18.05■□□□□ 0.48
CLN6-208ENST00000567060 PUF60Q9UHX1 559 aaKnown RBP18.05■□□□□ 0.48
CLN6-208ENST00000567060 CD207Q9UJ71 328 aa18.05■□□□□ 0.48
CLN6-208ENST00000567060 TRAPPC3O43617 180 aa18.04■□□□□ 0.48
CLN6-208ENST00000567060 CSPG5O95196 566 aa18.04■□□□□ 0.48
CLN6-208ENST00000567060 STX17P56962 302 aa18.04■□□□□ 0.48
CLN6-208ENST00000567060 TFAMQ00059 246 aaKnown RBP18.04■□□□□ 0.48
CLN6-208ENST00000567060 PDE12Q6L8Q7 609 aaKnown RBP18.04■□□□□ 0.48
CLN6-208ENST00000567060 EFCAB13Q8IY85 973 aa18.04■□□□□ 0.48
CLN6-208ENST00000567060 FUCA2Q9BTY2 467 aa18.04■□□□□ 0.48
CLN6-208ENST00000567060 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
CLN6-208ENST00000567060 DPP3Q9NY33 737 aa18.04■□□□□ 0.48
CLN6-208ENST00000567060 DNAJB4Q9UDY4 337 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms