RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 ADAM9Q13443 819 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 MYBPC2Q14324 1141 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 BMS1Q14692 1282 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 PSMD6Q15008 389 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 ZBTB6Q15916 424 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 CAVIN1Q6NZI2 390 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 DCLRE1AQ6PJP8 1040 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 NT5DC4Q86YG4 428 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 FAM186BQ8IYM0 893 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 C3orf58Q8NDZ4 430 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 CACTINQ8WUQ7 758 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 AUTS2Q8WXX7 1259 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 SYAP1Q96A49 352 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 CGRRF1Q99675 332 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 HERC2P3Q9BVR0 1158 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 VN1R3Q9BXE9 311 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 MTMR12Q9C0I1 747 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 DPP3Q9NY33 737 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 R3HCC1Q9Y3T6 440 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 PTPRJQ12913 1337 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 BICDL2A1A5D9 508 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 I3L4J1 428 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 C2CD2LO14523 706 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 CLSTN1O94985 981 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 SOD2P04179 222 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 KRT19P08727 400 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 KRT13P13646 458 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 BRCC3P46736 316 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 SMC1AQ14683 1233 aaKnown RBP17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 NFIL3Q16649 462 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 KIAA1841Q6NSI8 718 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 CEP57Q86XR8 500 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 B3GALT6Q96L58 329 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 GPR62Q9BZJ7 368 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 ZBP1Q9H171 429 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 NSUN3Q9H649 340 aaKnown RBP17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 UBE2ZQ9H832 354 aaPredicted RBP17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 STK39Q9UEW8 545 aa17.67■□□□□ 0.42
SCAMP2-208ENST00000566557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 TMEM189-UBE2V1I3L0A0 370 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 PPEF2O14830 753 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 TRAPPC3O43617 180 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 AKAP3O75969 853 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 ITGB3P05106 788 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 EPB41P11171 864 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 KCNA5P22460 613 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 LRPAP1P30533 357 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 POLR2BP30876 1174 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 PSMC2P35998 433 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 GLUD2P49448 558 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 NLRP12P59046 1061 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 ELAVL2Q12926 359 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 CAMK1Q14012 370 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 DPCR1Q3MIW9 517 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 LEXMQ3ZCV2 418 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 SASS6Q6UVJ0 657 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 MLKLQ8NB16 471 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 OR5B17Q8NGF7 314 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 PPP2R3CQ969Q6 453 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 POP1Q99575 1024 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 INTS13Q9NVM9 706 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 DACH1Q9UI36 760 aa17.66■□□□□ 0.42
SCAMP2-208ENST00000566557 BRWD1Q9NSI6 2320 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 CXCL14O95715 111 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 CTSAP10619 480 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 FKBP3Q00688 224 aaKnown RBP17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 DUOXA2Q1HG44 320 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 TCEAL5Q5H9L2 206 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 C9orf57Q5W0N0 161 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 PDE12Q6L8Q7 609 aaKnown RBP17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 DSTYKQ6XUX3 929 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 TAS1R1Q7RTX1 841 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 ADGRD2Q7Z7M1 963 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 RBM23Q86U06 439 aaKnown RBP17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 C1orf127Q8N9H9 656 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 MFSD14AQ96MC6 490 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 ZNF560Q96MR9 790 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 MMRN2Q9H8L6 949 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 NGRNQ9NPE2 291 aaKnown RBP17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 ITGA11Q9UKX5 1188 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 AGAP1Q9UPQ3 857 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 TRIOO75962 3097 aa17.65■□□□□ 0.42
SCAMP2-208ENST00000566557 LRRIQ3A6PVS8 624 aaPredicted RBP17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 FSCN2O14926 492 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 PHACTR2O75167 634 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 TRIM49P0CI25 452 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 TRIM49CP0CI26 452 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 IL9P15248 144 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 VAMP7P51809 220 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 BFSP1Q12934 665 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 BIRC3Q13489 604 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms