RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 SRGAP2O75044 1071 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CXCL10P02778 98 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 HOXA11P31270 313 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CD52P31358 61 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CYP2C18P33260 490 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CLCN6P51797 869 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CKAP4Q07065 602 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 MBTPS1Q14703 1052 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 MSANTD4Q8NCY6 345 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CCDC127Q96BQ5 260 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CPB2Q96IY4 423 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 MSTO1Q9BUK6 570 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CCDC94Q9BW85 323 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 WNT8AQ9H1J5 351 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 EPC1Q9H2F5 836 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 PDZD7Q9H5P4 517 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 PTPRHQ9HD43 1115 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 DNAH12Q6ZR08 3092 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 TRIM43BA6NCK2 446 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 FOXN3O00409 490 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 ABLIM1O14639 778 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 BUB1O43683 1085 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 EXTL3O43909 919 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 NBNO60934 754 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 PFKMP08237 780 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 SKIP12755 728 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 RAB27AP51159 221 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CCL23P55773 120 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 CLDN10P78369 228 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 TWF2Q6IBS0 349 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 ARHGEF19Q8IW93 802 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 HACE1Q8IYU2 909 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 LNX1Q8TBB1 728 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 TRIM43Q96BQ3 446 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 ZBTB45Q96K62 511 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 MMS19Q96T76 1030 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 TLR10Q9BXR5 811 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 PARD6BQ9BYG5 372 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 TRIM6Q9C030 488 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 ANKZF1Q9H8Y5 726 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 UBE2TQ9NPD8 197 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 ZNF446Q9NWS9 450 aa13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 AGO2Q9UKV8 859 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-208ENST00000565070 ZNF233A6NK53 670 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 OGTO15294 1046 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 LRRN2O75325 713 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 TCP1P17987 556 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 POU5F1Q01860 360 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 ARHGAP44Q17R89 818 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 ZNF572Q7Z3I7 529 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 CREG2Q8IUH2 290 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 C7orf61Q8IZ16 206 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 RPUSD2Q8IZ73 545 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 SCLYQ96I15 445 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 TRAIPQ9BWF2 469 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 CDT1Q9H211 546 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 HYOU1Q9Y4L1 999 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 SCN5AQ14524 2016 aa13.6□□□□□ -0.23
NSMCE1-208ENST00000565070 A0A0A6YYK5 440 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 ZNF185O15231 689 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 FAM189A1O60320 539 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 PALMO75781 387 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 H2AFZP0C0S5 128 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 WNT7BP56706 349 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 ITIH3Q06033 890 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 H2AFVQ71UI9 128 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 ZBTB33Q86T24 672 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 NOA1Q8NC60 698 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 FBXL13Q8NEE6 735 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 SEMA4DQ92854 862 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 OSBPL9Q96SU4 736 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 C1orf112Q9NSG2 853 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 RAB21Q9UL25 225 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 GRID2IPA4D2P6 1211 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 DSC3Q14574 896 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 PSMD6Q15008 389 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 ZBTB41Q5SVQ8 909 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 CNKSR3Q6P9H4 555 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 CRELD2Q6UXH1 353 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 SV2AQ7L0J3 742 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 GLYCTKQ8IVS8 523 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 DPF3Q92784 378 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 CAPZA3Q96KX2 299 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 TOPORSQ9NS56 1045 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 RAB20Q9NX57 234 aa13.59□□□□□ -0.23
NSMCE1-208ENST00000565070 PDE2AO00408 941 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-208ENST00000565070 ZRANB2O95218 330 aaKnown RBP eCLIP13.58□□□□□ -0.24
NSMCE1-208ENST00000565070 NPTXRO95502 500 aa13.58□□□□□ -0.24
NSMCE1-208ENST00000565070 TUBBP07437 444 aa13.58□□□□□ -0.24
NSMCE1-208ENST00000565070 CLTAP09496 248 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms