RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-204	ENST00000564970	OR6Y1	Q8NGX8	325 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	NEDD1	Q8NHV4	660 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	CHAC2	Q8WUX2	184 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	TRUB1	Q8WWH5	349 aa	Known RBP	6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	PRPF31	Q8WWY3	499 aa	Known RBP	6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	NLRP7	Q8WX94	980 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	CASKIN2	Q8WXE0	1202 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	SEPT8	Q92599	483 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	MCUR1	Q96AQ8	359 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	HSPBAP1	Q96EW2	488 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	C11orf24	Q96F05	449 aa	Predicted RBP	6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	DYDC2	Q96IM9	177 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	SPATA17	Q96L03	361 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	C1orf74	Q96LT6	269 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	SERPINB12	Q96P63	405 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	DLC1	Q96QB1	1528 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	BTBD10	Q9BSF8	475 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	CENPO	Q9BU64	300 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	MRPL9	Q9BYD2	267 aa	Known RBP	6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	EDEM3	Q9BZQ6	932 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	OR2B2	Q9GZK3	357 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	PABPC3	Q9H361	631 aa	Known RBP	6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	GGNBP2	Q9H3C7	697 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	C8orf33	Q9H7E9	229 aa	Predicted RBP	6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	RIC8A	Q9NPQ8	531 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	ZNF277	Q9NRM2	450 aa	Predicted RBP	6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	NDFIP2	Q9NV92	336 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	CLIC5	Q9NZA1	410 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	TMEM9	Q9P0T7	183 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	ASIC3	Q9UHC3	531 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	ATP6V1H	Q9UI12	483 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	TMEM59L	Q9UK28	342 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	RAB26	Q9ULW5	256 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	SNX7	Q9UNH6	387 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	TLL2	Q9Y6L7	1015 aa		6.63	□□□□□ -1.35
PTPN9-204	ENST00000564970	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	CEP350	Q5VT06	3117 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	AGL	P35573	1532 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ADGRA3	Q8IWK6	1321 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	PTPDC1	A2A3K4	754 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	GOLGA8IP	A6NC78	632 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	FAM187A	A6NFU0	413 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	OR6C65	A6NJZ3	312 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	RSPH10B2	B2RC85	870 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	FAM25A	B3EWG3	89 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	FAM25C	B3EWG5	89 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	FAM25G	B3EWG6	89 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970		H0YJX3	145 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ENPP3	O14638	875 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	MUSK	O15146	869 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SHOX	O15266	292 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	MAF	O75444	373 aa	Predicted RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SULT1C4	O75897	302 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	UPP2	O95045	317 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SPATA31D3	P0C874	917 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	RSPH10B	P0C881	870 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ZCCHC18	P0CG32	403 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SFTPC	P11686	197 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	PRKACA	P17612	351 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	KCNA6	P17658	529 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	GAP43	P17677	238 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ATF6	P18850	670 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	CDH2	P19022	906 aa	Predicted RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ITGAX	P20702	1163 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	EEF1G	P26641	437 aa	Known RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	TYK2	P29597	1187 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	PRDX6	P30041	224 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	HOXD13	P35453	343 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ETFB	P38117	255 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	AP2S1	P53680	142 aa	Predicted RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	MLLT6	P55198	1093 aa	Predicted RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	P2RX3	P56373	397 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	POLR2F	P61218	127 aa	Known RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	HERVK_113	P62684	666 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	DAB2	P98082	770 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	IL9R	Q01113	521 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	KRT17	Q04695	432 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	PRKCQ	Q04759	706 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	COASY	Q13057	564 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	TOB2	Q14106	344 aa	Predicted RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ACAP2	Q15057	778 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	MAPRE1	Q15691	268 aa	Known RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	TBCC	Q15814	346 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SLC15A2	Q16348	729 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	DGKD	Q16760	1214 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	CWF19L2	Q2TBE0	894 aa	Known RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	DNAL1	Q4LDG9	190 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	USPL1	Q5W0Q7	1092 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	TSHZ3	Q63HK5	1081 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ERAP2	Q6P179	960 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SHQ1	Q6PI26	577 aa	Known RBP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	IZUMO2	Q6UXV1	221 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SPATA31D4	Q6ZUB0	917 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	PTF1A	Q7RTS3	328 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ZNF410	Q86VK4	478 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	PDSS2	Q86YH6	399 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ZNF34	Q8IZ26	560 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	CENPS	Q8N2Z9	138 aa		6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
PTPN9-204	ENST00000564970	SIMC1	Q8NDZ2	872 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms