RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	NKD2	Q969F2	451 aa	Predicted RBP	4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	COA7	Q96BR5	231 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	C8orf48	Q96LL4	319 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	ING3	Q9NXR8	418 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	POGK	Q9P215	609 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	GABBR1	Q9UBS5	961 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	PUF60	Q9UHX1	559 aa	Known RBP	4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	DUSP10	Q9Y6W6	482 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	SPATA31A3	Q5VYP0	1347 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	SBNO1	A3KN83	1393 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	POLR3A	O14802	1390 aa	Predicted RBP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431		A0A1W2PR48	441 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	C2orf78	A6NCI8	922 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	VSTM5	A8MXK1	200 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	ARHGAP6	O43182	974 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	PRPF3	O43395	683 aa	Known RBP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	CTNND1	O60716	968 aa	Known RBP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	TOX4	O94842	621 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	ENDOD1	O94919	500 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	JUN	P05412	331 aa	Known RBP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	KIR2DL3	P43628	341 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	HMGA2	P52926	109 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	RAC3	P60763	192 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	NBPF8	Q3BBV2	869 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	ABHD15	Q6UXT9	468 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	ARHGEF18	Q6ZSZ5	1173 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	TAS1R1	Q7RTX1	841 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	C11orf96	Q7Z7L8	435 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	LGI4	Q8N135	537 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	SDR16C5	Q8N3Y7	309 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	PIK3C3	Q8NEB9	887 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	OR5M3	Q8NGP4	307 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	ZNF480	Q8WV37	535 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	SNX33	Q8WV41	574 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	AIFM3	Q96NN9	605 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	RPS6KC1	Q96S38	1066 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	CDC5L	Q99459	802 aa	Known RBP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	SLC6A15	Q9H2J7	730 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	MANSC1	Q9H8J5	431 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	TDP1	Q9NUW8	608 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	SWAP70	Q9UH65	585 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	SERPINB13	Q9UIV8	391 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	LIMCH1	Q9UPQ0	1083 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	PCDHA13	Q9Y5I0	950 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	ZNF536	O15090	1300 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	AFF2	P51816	1311 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	PLCH1	Q4KWH8	1693 aa		4.96	□□□□□ -1.62
LRRC28-222	ENST00000561431	NRK	Q7Z2Y5	1582 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	NRAP	Q86VF7	1730 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	NRP1	O14786	923 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	TMEM127	O75204	238 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	WDHD1	O75717	1129 aa	Predicted RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	KRT18	P05783	430 aa	Known RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	POU2F2	P09086	479 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	PTPN7	P35236	360 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	NPEPPS	P55786	919 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	ZNF267	Q14586	743 aa	Predicted RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	ACAP1	Q15027	740 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	PGS1	Q32NB8	556 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	USP45	Q70EL2	814 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	DRC7	Q8IY82	874 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	PQLC1	Q8N2U9	271 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	PPP1R14C	Q8TAE6	165 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	CCHCR1	Q8TD31	782 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	SECISBP2L	Q93073	1101 aa	Known RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	ARL8A	Q96BM9	186 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	PCGF6	Q9BYE7	350 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	GTPBP4	Q9BZE4	634 aa	Known RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	SLIT2	O94813	1529 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	RGS12	O14924	1447 aa		4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.95	□□□□□ -1.62
LRRC28-222	ENST00000561431	BCL9L	Q86UU0	1499 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	ARHGEF10	O15013	1369 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	ROCK2	O75116	1388 aa	Known RBP	4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	TONSL	Q96HA7	1378 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	ERC2	O15083	957 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	HTRA2	O43464	458 aa	Predicted RBP	4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	VSIG10L2	P0DP72	767 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	GYPE	P15421	78 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	LPO	P22079	712 aa	Predicted RBP	4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	BDNF	P23560	247 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	CNR2	P34972	360 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	WNT3A	P56704	352 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	TBX4	P57082	545 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	PPP3CA	Q08209	521 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	MGAT2	Q10469	447 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	IL10RA	Q13651	578 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	RNF151	Q2KHN1	245 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	C19orf54	Q5BKX5	351 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	MEX3C	Q5U5Q3	659 aa	Known RBP	4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	ZNF772	Q68DY9	489 aa	Predicted RBP	4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	GADL1	Q6ZQY3	521 aa		4.94	□□□□□ -1.62
LRRC28-222	ENST00000561431	PDZD4	Q76G19	769 aa	Predicted RBP	4.94	□□□□□ -1.62

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