RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 SH2D3CQ8N5H7 860 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 RNF169Q8NCN4 708 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 FAM193BQ96PV7 902 aaPredicted RBP6.26□□□□□ -1.41
CRNDE-208ENST00000560029 CPEB1Q9BZB8 566 aaKnown RBP6.26□□□□□ -1.41
CRNDE-208ENST00000560029 C11orf54Q9H0W9 315 aaPredicted RBP6.26□□□□□ -1.41
CRNDE-208ENST00000560029 SPON1Q9HCB6 807 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 C1orf112Q9NSG2 853 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 CALCOCO1Q9P1Z2 691 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 GABBR1Q9UBS5 961 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 POLHQ9Y253 713 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
CRNDE-208ENST00000560029 PNPLA7Q6ZV29 1317 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 TCRBV7S2A1N4TA0A589 114 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 KLRG2A4D1S0 409 aaPredicted RBP6.25□□□□□ -1.41
CRNDE-208ENST00000560029 A6NNZ2 444 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 PRR5-ARHGAP8B1AHC4 643 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 B3GALT2O43825 422 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 MFAP3LO75121 409 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 SNRPA1P09661 255 aaKnown RBP6.25□□□□□ -1.41
CRNDE-208ENST00000560029 SBK3P0C264 359 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 FBLP22087 321 aaKnown RBP6.25□□□□□ -1.41
CRNDE-208ENST00000560029 NR4A1P22736 598 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 SMARCA1P28370 1054 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 RABGGTBP53611 331 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 CLRN1P58418 232 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 CREMQ03060 361 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 GBX1Q14549 363 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 BMT2Q1RMZ1 405 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 RABL3Q5HYI8 236 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 ZNF529Q6P280 563 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 SLC4A10Q6U841 1118 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 DOK3Q7L591 496 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 UBE3BQ7Z3V4 1068 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 KLHDC4Q8TBB5 520 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 TFAP2CQ92754 450 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 ZNF764Q96H86 408 aaPredicted RBP6.25□□□□□ -1.41
CRNDE-208ENST00000560029 LRFN3Q9BTN0 628 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 ARMT1Q9H993 441 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 PRDM11Q9NQV5 511 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 LMBRD1Q9NUN5 540 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 ABCF2Q9UG63 623 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 STXBP5LQ9Y2K9 1186 aa6.25□□□□□ -1.41
CRNDE-208ENST00000560029 H3BUI4 141 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 KIAA0391O15091 583 aaKnown RBP6.24□□□□□ -1.41
CRNDE-208ENST00000560029 GRM6O15303 877 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 PJA2O43164 708 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 PRC1O43663 620 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 TUSC2O75896 110 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 IPO13O94829 963 aaKnown RBP6.24□□□□□ -1.41
CRNDE-208ENST00000560029 CD1AP06126 327 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 GNALP38405 381 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 TBX4P57082 545 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 FLYWCH1Q4VC44 716 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 LRCH2Q5VUJ6 765 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 SEM1Q6ZVN7 128 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 GPRIN1Q7Z2K8 1008 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 DGKHQ86XP1 1220 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 MDGA1Q8NFP4 955 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 PLBD2Q8NHP8 589 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 PROKR1Q8TCW9 393 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 ATXN2LQ8WWM7 1075 aaKnown RBP6.24□□□□□ -1.41
CRNDE-208ENST00000560029 MNTQ99583 582 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 B3GNT5Q9BYG0 378 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 MAN1C1Q9NR34 630 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 GEMIN8Q9NWZ8 242 aaKnown RBP6.24□□□□□ -1.41
CRNDE-208ENST00000560029 PACSIN3Q9UKS6 424 aa6.24□□□□□ -1.41
CRNDE-208ENST00000560029 F2RL2O00254 374 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 TYRP14679 529 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 ATP2B3Q16720 1220 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 DACT2Q5SW24 774 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 ATXN7L2Q5T6C5 722 aaPredicted RBP6.23□□□□□ -1.41
CRNDE-208ENST00000560029 EFCAB12Q6NXP0 572 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 NPNTQ6UXI9 565 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 DAAM2Q86T65 1068 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 GLCCI1Q86VQ1 547 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 COL23A1Q86Y22 540 aaPredicted RBP6.23□□□□□ -1.41
CRNDE-208ENST00000560029 OR52N2Q8NGI0 321 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 SLC35A4Q96G79 324 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 CDK5RAP3Q96JB5 506 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 PNPOQ9NVS9 261 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 FBXO34Q9NWN3 711 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 POGKQ9P215 609 aa6.23□□□□□ -1.41
CRNDE-208ENST00000560029 FEZ2Q9UHY8 353 aaPredicted RBP6.23□□□□□ -1.41
CRNDE-208ENST00000560029 NT5C1B-RDH14C9J2C7 533 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 RHOBTB3O94955 611 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 ARIH2O95376 493 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 USP14P54578 494 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 NKX6-1P78426 367 aaPredicted RBP6.22□□□□□ -1.41
CRNDE-208ENST00000560029 GALEQ14376 348 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 PLS1Q14651 629 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 PABPC1LQ4VXU2 614 aaKnown RBP6.22□□□□□ -1.41
CRNDE-208ENST00000560029 C1QL3Q5VWW1 255 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 RHOUQ7L0Q8 258 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 ZFP28Q8NHY6 868 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 PHACTR3Q96KR7 559 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 NT5C1BQ96P26 610 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 NDC1Q9BTX1 674 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 TMEM60Q9H2L4 133 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 FAM204AQ9H8W3 233 aa6.22□□□□□ -1.41
CRNDE-208ENST00000560029 STAP2Q9UGK3 403 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms