RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 RAMP2O60895 175 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 SPDEFO95238 335 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 FOSP01100 380 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-207ENST00000558919 SBK3P0C264 359 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 SLC6A4P31645 630 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 BLOC1S1P78537 153 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 TTF1Q15361 905 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-207ENST00000558919 KHDC1Q4VXA5 237 aaKnown RBP4.83□□□□□ -1.64
VPS13C-207ENST00000558919 ABHD17BQ5VST6 288 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 USP45Q70EL2 814 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 VRK3Q8IV63 474 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 C3orf20Q8ND61 904 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 HOOK2Q96ED9 719 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 MARS2Q96GW9 593 aaKnown RBP4.83□□□□□ -1.64
VPS13C-207ENST00000558919 TTPALQ9BTX7 342 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 PACSIN1Q9BY11 444 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 ALOXE3Q9BYJ1 711 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 WDR11Q9BZH6 1224 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 IKZF4Q9H2S9 585 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 SIDT1Q9NXL6 827 aaKnown RBP4.83□□□□□ -1.64
VPS13C-207ENST00000558919 ANKRD6Q9Y2G4 727 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 AATKQ6ZMQ8 1374 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 GRID2IPA4D2P6 1211 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 UNC119BA6NIH7 251 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 ABLIM3O94929 683 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 RHOBTB3O94955 611 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 ANXA1P04083 346 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 CD1AP06126 327 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 FTH1P19P0C7X4 201 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 EGR2P11161 476 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-207ENST00000558919 MALP21145 153 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 CXADRP78310 365 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 HSD11B2P80365 405 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 MCL1Q07820 350 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 SLFN5Q08AF3 891 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 SNAPC2Q13487 334 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 TP53BP2Q13625 1128 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 UTP14CQ5TAP6 766 aaKnown RBP4.82□□□□□ -1.64
VPS13C-207ENST00000558919 PCSK4Q6UW60 755 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 ZNF365Q70YC5 407 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 LCORLQ8N3X6 602 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 AOPEPQ8N6M6 819 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 COQ10AQ96MF6 247 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 VRK1Q99986 396 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-207ENST00000558919 CYP4F11Q9HBI6 524 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 GALNT9Q9HCQ5 603 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 USP25Q9UHP3 1055 aa4.82□□□□□ -1.64
VPS13C-207ENST00000558919 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 MYADML2A6NDP7 307 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 NT5C1B-RDH14C9J2C7 533 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 AGFG2O95081 481 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 GCP02774 474 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 HKR1P10072 659 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 FCER1AP12319 257 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 TGM1P22735 817 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 CYP2C19P33261 490 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 AVPR1BP47901 424 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 USP14P54578 494 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 CYP2A13Q16696 494 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 SLC4A10Q6U841 1118 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 Q6YL49 198 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 PDSS2Q86YH6 399 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 ASB10Q8WXI3 467 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 CAMKK2Q96RR4 588 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 TOR3AQ9H497 397 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 SLITRK6Q9H5Y7 841 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 GNL3LQ9NVN8 582 aaKnown RBP4.81□□□□□ -1.64
VPS13C-207ENST00000558919 SYBUQ9NX95 663 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 HSFX1Q9UBD0 423 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 IP6K2Q9UHH9 426 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 PACSIN3Q9UKS6 424 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 PNMA8BQ9ULN7 279 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-207ENST00000558919 MTO1Q9Y2Z2 717 aaKnown RBP4.81□□□□□ -1.64
VPS13C-207ENST00000558919 NEU2Q9Y3R4 380 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 DMRT1Q9Y5R6 373 aa4.81□□□□□ -1.64
VPS13C-207ENST00000558919 F2RL2O00254 374 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 ERN1O75460 977 aaKnown RBP4.8□□□□□ -1.64
VPS13C-207ENST00000558919 PF4V1P10720 104 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 SMARCA1P28370 1054 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 HK3P52790 923 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 EPHB1P54762 984 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 SCAPQ12770 1279 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 PIN1Q13526 163 aaPredicted RBP4.8□□□□□ -1.64
VPS13C-207ENST00000558919 PGS1Q32NB8 556 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 FLYWCH1Q4VC44 716 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 HECTD2Q5U5R9 776 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 COLGALT2Q8IYK4 626 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 Q8NA96 180 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 SUPT20HQ8NEM7 779 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 RGMAQ96B86 450 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 NACC2Q96BF6 587 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 GTPBP4Q9BZE4 634 aaKnown RBP4.8□□□□□ -1.64
VPS13C-207ENST00000558919 WDCPQ9H6R7 721 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 KMT5AQ9NQR1 393 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 RLIMQ9NVW2 624 aa4.8□□□□□ -1.64
VPS13C-207ENST00000558919 FTLP02792 175 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-207ENST00000558919 GNAI3P08754 354 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 CT47B1P0C2W7 299 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms