RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 PPM1LQ5SGD2 360 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SCARA3Q6AZY7 606 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 FAM173BQ6P4H8 233 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 PDXDC1Q6P996 788 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ANKS3Q6ZW76 656 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 RTL10Q7L3V2 364 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 GET4Q7L5D6 327 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ASCL5Q7RTU5 278 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 NPAS3Q8IXF0 933 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CCDC105Q8IYK2 499 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 TCEAL8Q8IYN2 117 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 MAML2Q8IZL2 1156 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SIX5Q8N196 739 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ZNF687Q8N1G0 1237 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SPOCK2Q92563 424 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 RAD54LQ92698 747 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 DDX12PQ92771 950 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 STAMQ92783 540 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 NXPE3Q969Y0 559 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 EPSTI1Q96J88 318 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SUSD3Q96L08 255 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 DDX23Q9BUQ8 820 aaKnown RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CCDC94Q9BW85 323 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 LRRC3Q9BY71 257 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 PLA2G2FQ9BZM2 168 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CCSER1Q9C0I3 900 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CRISPLD1Q9H336 500 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 PIDD1Q9HB75 910 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 AVENQ9NQS1 362 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 TOPORSQ9NS56 1045 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 FBXO2Q9UK22 296 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 FBXL5Q9UKA1 691 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CPSF3Q9UKF6 684 aaKnown RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CDH7Q9ULB5 785 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ODF2LQ9ULJ1 636 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 TBX20Q9UMR3 447 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SMC3Q9UQE7 1217 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CLIC4Q9Y696 253 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 STYXL1Q9Y6J8 313 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ZFP37Q9Y6Q3 630 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 DMXL1Q9Y485 3027 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 HELZP42694 1942 aaKnown RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 NCANO14594 1321 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 A0A087X0B3 334 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 A0A0B4J269 797 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 LACTBL1A8MY62 500 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 H3BQV1 296 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 PIRO00625 290 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 SYN3O14994 580 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 CLDN3O15551 220 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 TRAK2O60296 914 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 LRRN2O75325 713 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 OAZ2O95190 189 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 CYP3A5P20815 502 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 SYT1P21579 422 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 NMT1P30419 496 aaKnown RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 DDIT3P35638 169 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 LONP1P36776 959 aaKnown RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 GUCY2FP51841 1108 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 YARSP54577 528 aaKnown RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 EPHA5P54756 1037 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 WNT7BP56706 349 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 STARD6P59095 220 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 FZD5Q13467 585 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 TMEM132AQ24JP5 1023 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 ZC2HC1CQ53FD0 456 aaPredicted RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 SPECC1Q5M775 1068 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 PHLDB3Q6NSJ2 640 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 ELMSAN1Q6PJG2 1045 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 CRELD2Q6UXH1 353 aaPredicted RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 BRAPQ7Z569 592 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 GPBP1Q86WP2 473 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 MAP4K3Q8IVH8 894 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 DTWD2Q8NBA8 298 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 FLCNQ8NFG4 579 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 BEST2Q8NFU1 509 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 CXorf38Q8TB03 319 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 ATOH1Q92858 354 aaPredicted RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 DNAJC19Q96DA6 116 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 BORCS6Q96GS4 357 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 ZSWIM3Q96MP5 696 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 CLIC6Q96NY7 704 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 TCHPQ9BT92 498 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 ST6GALNAC4Q9H4F1 302 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 PLEKHA5Q9HAU0 1116 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 SLC38A7Q9NVC3 462 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 CEP72Q9P209 647 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 LARSQ9P2J5 1176 aaKnown RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 ANKFY1Q9P2R3 1169 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 KCNG1Q9UIX4 513 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 KCNH3Q9ULD8 1083 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 CA14Q9ULX7 337 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 PCDHB8Q9UN66 801 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 MTF2Q9Y483 593 aaPredicted RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 KIF3AQ9Y496 699 aa6.05□□□□□ -1.44
SMAD3-209ENST00000558894 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 MORC2Q9Y6X9 1032 aaPredicted RBP6.05□□□□□ -1.44
SMAD3-209ENST00000558894 EML5Q05BV3 1969 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 ZNF638Q14966 1978 aaKnown RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 ANO9A1A5B4 782 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms