RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PARP10Q53GL7 1025 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 LVRNQ6Q4G3 990 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 FBXO33Q7Z6M2 555 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 TMPRSS6Q8IU80 811 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 RFWD2Q8NHY2 731 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 ZNF653Q96CK0 615 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 DYDC2Q96IM9 177 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 C9orf72Q96LT7 481 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 REEP2Q9BRK0 252 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 DCLK3Q9C098 648 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 VPS11Q9H270 941 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CHST7Q9NS84 486 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 FOXN3O00409 490 aaPredicted RBP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 STRNO43815 780 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 LGR5O75473 907 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 IL1BP01584 269 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 FGFR1P11362 822 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ASPHQ12797 758 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 MAPK6Q16659 721 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 AAGABQ6PD74 315 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 PDSS2Q86YH6 399 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 RNF168Q8IYW5 571 aaPredicted RBP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ZNF564Q8TBZ8 553 aaPredicted RBP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 FAM163AQ96GL9 167 aaPredicted RBP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 MPP4Q96JB8 637 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 C17orf75Q9HAS0 396 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 TIMMDC1Q9NPL8 285 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 LRRC4BQ9NT99 713 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 FETUBQ9UGM5 382 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ZNF232Q9UNY5 417 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 A6NJR5 290 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 TM9SF1O15321 606 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 TGFB1I1O43294 461 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 BUD23O43709 281 aaKnown RBP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 MED24O75448 989 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 GAP43P17677 238 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 RRM1P23921 792 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ALDH1B1P30837 517 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ARHGAP4P98171 946 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ZBTB16Q05516 673 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 MED21Q13503 144 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 DLGAP5Q15398 846 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 CFAP157Q5JU67 520 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 IZUMO3Q5VZ72 239 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 B3GNT6Q6ZMB0 384 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 PRUNE1Q86TP1 453 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 LRRC6Q86X45 466 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 NEDD1Q8NHV4 660 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 SLC20A1Q8WUM9 679 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 HAUS1Q96CS2 278 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 RBM15Q96T37 977 aaKnown RBP eCLIP11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ANKRD2Q9GZV1 360 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 OLFML3Q9NRN5 406 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 DCTN4Q9UJW0 460 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
PCAT29-201ENST00000558411 A0A0J9YVX5 310 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 EML1O00423 815 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 CLIC2O15247 247 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 OPHN1O60890 802 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 TM7SF2O76062 418 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 SERPINB3P29508 390 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 SLC1A1P43005 524 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 CD151P48509 253 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 NOVP48745 357 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 MYL7Q01449 175 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.85□□□□□ -0.51
PCAT29-201ENST00000558411 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 MAP3K21Q5TCX8 1036 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 ZNF554Q86TJ5 538 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 KIAA0825Q8IV33 1275 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 SCUBE1Q8IWY4 988 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 C4orf33Q8N1A6 199 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 ZNF276Q8N554 614 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 OR6Y1Q8NGX8 325 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 FAM161BQ96MY7 647 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 PWWP2AQ96N64 755 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 NUP85Q9BW27 656 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 RANBP17Q9H2T7 1088 aaKnown RBP11.85□□□□□ -0.51
PCAT29-201ENST00000558411 PSMC3IPQ9P2W1 217 aaPredicted RBP11.85□□□□□ -0.51
PCAT29-201ENST00000558411 GTF3C4Q9UKN8 822 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 DNM3Q9UQ16 869 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 WDR37Q9Y2I8 494 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 SNED1Q8TER0 1413 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 UBE4BO95155 1302 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 SPATA31A5Q5VU36 1347 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 SPATA31A6Q5VVP1 1343 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 SPATA31A7Q8IWB4 1347 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 ITGB4P16144 1822 aa11.85□□□□□ -0.51
PCAT29-201ENST00000558411 A0A0G2JND7 137 aa11.84□□□□□ -0.51
PCAT29-201ENST00000558411 TMEM221A6NGB7 291 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms