RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ASMTLO95671 621 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 CALRP27797 417 aaKnown RBP17.29■□□□□ 0.36
SHMT2-232ENST00000557487 HSD17B4P51659 736 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 DACT2Q5SW24 774 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 DRICH1Q6PGQ1 229 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-232ENST00000557487 KIAA0825Q8IV33 1275 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 C4orf19Q8IY42 314 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 EXD1Q8NHP7 514 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 VCPIP1Q96JH7 1222 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 ETNK1Q9HBU6 452 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 TBC1D22BQ9NU19 505 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 GGT7Q9UJ14 662 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 STK38LQ9Y2H1 464 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 PCDHB2Q9Y5E7 798 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 MROH7Q68CQ1 1323 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 GSTTP1A0A1W2PQM5 241 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 GH1P01241 217 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 ABCD1P33897 745 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 MAGEA4P43358 317 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 TRABD2AQ86V40 505 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 APLFQ8IW19 511 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-232ENST00000557487 CYP4X1Q8N118 509 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 KIF2BQ8N4N8 673 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 ZNF398Q8TD17 642 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 ATG4AQ8WYN0 398 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 ZNF570Q96NI8 536 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 C17orf75Q9HAS0 396 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
SHMT2-232ENST00000557487 SSU72Q9NP77 194 aaKnown RBP17.29■□□□□ 0.36
SHMT2-232ENST00000557487 ANKEF1Q9NU02 776 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 TBX20Q9UMR3 447 aa17.29■□□□□ 0.36
SHMT2-232ENST00000557487 KLRC2P26717 231 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 MGAT5Q09328 741 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 ANKRD20A2Q5SQ80 823 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 ANKRD20A1Q5TYW2 823 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 ANKRD20A3Q5VUR7 823 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 VSIG1Q86XK7 387 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 CBWD2Q8IUF1 395 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 SPICE1Q8N0Z3 855 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 LRRC37BQ96QE4 947 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 KCNH7Q9NS40 1196 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 CORO1CQ9ULV4 474 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-232ENST00000557487 NFASCO94856 1347 aa17.28■□□□□ 0.36
SHMT2-232ENST00000557487 TRAFD1O14545 582 aaPredicted RBP17.27■□□□□ 0.36
SHMT2-232ENST00000557487 ABLIM1O14639 778 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 CLGNO14967 610 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 DHX15O43143 795 aaKnown RBP17.27■□□□□ 0.36
SHMT2-232ENST00000557487 ITGB5P18084 799 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 YWHABP31946 246 aaKnown RBP17.27■□□□□ 0.36
SHMT2-232ENST00000557487 FOXN2P32314 431 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 NSFP46459 744 aaKnown RBP17.27■□□□□ 0.36
SHMT2-232ENST00000557487 UBXN2AP68543 259 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 IRX1P78414 480 aaPredicted RBP17.27■□□□□ 0.36
SHMT2-232ENST00000557487 GHRHRQ02643 423 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 PDK4Q16654 411 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 WASHC2DQ5SRD0 308 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 MAEAQ7L5Y9 396 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 ERICH1Q86X53 443 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 OGFOD1Q8N543 542 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 SPIRE2Q8WWL2 714 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 RBM15Q96T37 977 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHMT2-232ENST00000557487 OSBPL8Q9BZF1 889 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 RNPEPL1Q9HAU8 725 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 MLXIPLQ9NP71 852 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 SCINQ9Y6U3 715 aa17.27■□□□□ 0.36
SHMT2-232ENST00000557487 EXOC1LA0A1B0GW35 172 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 FAM170AA1A519 330 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 SLC16A4O15374 487 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 CYP1A1P04798 512 aaPredicted RBP17.27■□□□□ 0.35
SHMT2-232ENST00000557487 RALAP11233 206 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 CETPP11597 493 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 KRT5P13647 590 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 RRM1P23921 792 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 JAK3P52333 1124 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 PEX3P56589 373 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 WDR4P57081 412 aaKnown RBP17.27■□□□□ 0.35
SHMT2-232ENST00000557487 JAG1P78504 1218 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 CYP24A1Q07973 514 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 MOGSQ13724 837 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 BLMHQ13867 455 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 TMED2Q15363 201 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 TMEM63BQ5T3F8 832 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 LDHDQ86WU2 507 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 TAS1R2Q8TE23 839 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 PRCCQ92733 491 aaPredicted RBP17.27■□□□□ 0.35
SHMT2-232ENST00000557487 CSRNP1Q96S65 589 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 AGO4Q9HCK5 861 aaKnown RBP17.27■□□□□ 0.35
SHMT2-232ENST00000557487 ACP6Q9NPH0 428 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 C1orf112Q9NSG2 853 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 MAP3K20Q9NYL2 800 aaKnown RBP17.27■□□□□ 0.35
SHMT2-232ENST00000557487 FETUBQ9UGM5 382 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 SLC24A2Q9UI40 661 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 UBIAD1Q9Y5Z9 338 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 MYPNQ86TC9 1320 aa17.27■□□□□ 0.35
SHMT2-232ENST00000557487 GOLGA8IPA6NC78 632 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms