RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 LMBRD2Q68DH5 695 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 LLGL2Q6P1M3 1020 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 CD300LGQ6UXG3 332 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 CACTINQ8WUQ7 758 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 CCDC127Q96BQ5 260 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 FAM84AQ96KN4 292 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 FNBP1Q96RU3 617 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 TTPALQ9BTX7 342 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 MTMR12Q9C0I1 747 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 NUP62CLQ9H1M0 184 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 CLSTN2Q9H4D0 955 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 UBE2ZQ9H832 354 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 CHST7Q9NS84 486 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 COG5Q9UP83 839 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 TRAF3IP3Q9Y228 551 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 A0A0C4DFX4 3053 aa11.45□□□□□ -0.58
HNRNPC-232ENST00000557442 PSMA7O14818 248 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 CLASP2O75122 1294 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 GLP2RO95838 553 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 TNNC2P02585 160 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 ITGB3P05106 788 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 ADH1AP07327 375 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 CNPP09543 421 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 KCNA5P22460 613 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 FGFR3P22607 806 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 RPL13P26373 211 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 TKTP29401 623 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 RBM10P98175 930 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 CREMQ03060 361 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 TFF2Q03403 129 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 COL19A1Q14993 1142 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 PSMD6Q15008 389 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 PSMD5Q16401 504 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 ZCWPW2Q504Y3 356 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 COBLL1Q53SF7 1204 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 PRSS55Q6UWB4 352 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 WDR49Q8IV35 697 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 GLYCTKQ8IVS8 523 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 PIK3R5Q8WYR1 880 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 ANKRD36BP1Q96IX9 119 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 ZNF560Q96MR9 790 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 CGRRF1Q99675 332 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 TSG101Q99816 390 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■□□□□ 9.1
HNRNPC-232ENST00000557442 DMAC2Q9NW81 257 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 BARX2Q9UMQ3 279 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 FRMD4BQ9Y2L6 1034 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 HCFC2Q9Y5Z7 792 aa11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 SPTBN5Q9NRC6 3674 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-232ENST00000557442 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 TRIM49BA6NDI0 452 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 H3BQ06 376 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 PIRO00625 290 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 SYN3O14994 580 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 TEX28O15482 410 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 LILRB3O75022 631 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 KRT19P08727 400 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 RPL17P18621 184 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 TNNI1P19237 187 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 KLRC2P26717 231 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 POLR2BP30876 1174 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 PPP1R2P41236 205 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 CASP4P49662 377 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 ADAM15Q13444 863 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 MORC3Q14149 939 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 MYBPC2Q14324 1141 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 CLUL1Q15846 466 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 NFIL3Q16649 462 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 CTC1Q2NKJ3 1217 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 EDRF1Q3B7T1 1238 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 PDXDC1Q6P996 788 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 DSTYKQ6XUX3 929 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 PPFIBP1Q86W92 1011 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 ADSSL1Q8N142 457 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 C1orf127Q8N9H9 656 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 VN1R2Q8NFZ6 395 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 OR5B17Q8NGF7 314 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 GPT2Q8TD30 523 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 TMEM174Q8WUU8 243 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 SUSD3Q96L08 255 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 KLHL5Q96PQ7 755 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 INTS13Q9NVM9 706 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 KIAA1468Q9P260 1216 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 ITGA11Q9UKX5 1188 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 VCANP13611 3396 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 DENND4CQ5VZ89 1909 aa11.43□□□□□ -0.58
HNRNPC-232ENST00000557442 DOCK8Q8NF50 2099 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 EPCAMP16422 314 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 BMP6P22004 513 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms