RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 MCOLN2Q8IZK6 566 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 CEP120Q8N960 986 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 CPA5Q8WXQ8 436 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 CYFIP2Q96F07 1278 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 FAXDC2Q96IV6 333 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 VCPIP1Q96JH7 1222 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 ADPGKQ9BRR6 497 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 PDZD7Q9H5P4 517 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 AVENQ9NQS1 362 aaPredicted RBP10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 NRCAMQ92823 1304 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 ZNF236Q9UL36 1845 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 TMEM110-MUSTN1A8MSY1 372 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 ADCY6O43306 1168 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 THAP12O43422 761 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 CALCAP01258 141 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 FGGP02679 453 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 ZNF865P0CJ78 1059 aaPredicted RBP10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 COMTP21964 271 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 RGS2P41220 211 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 SMC1AQ14683 1233 aaKnown RBP10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 PPP2R5EQ16537 467 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 NAA35Q5VZE5 725 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 OLFML2BQ68BL8 750 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 TLK2Q86UE8 772 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 KLHL7Q8IXQ5 586 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 UBR7Q8N806 425 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 ZNF606Q8WXB4 792 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 CPB2Q96IY4 423 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 VIPAS39Q9H9C1 493 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 ZFYVE28Q9HCC9 887 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 SETD4Q9NVD3 440 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 CHORDC1Q9UHD1 332 aaPredicted RBP10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 UMODL1Q5DID0 1318 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 EVPLQ92817 2033 aa10.78□□□□□ -0.68
EFCAB11-209ENST00000556005 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 CCDC66A2RUB6 948 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 LACTBL1A8MY62 500 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 SPOPO43791 374 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 TSPAN1O60635 241 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 HEXIM1O94992 359 aaKnown RBP10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 F2P00734 622 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 KRT19P08727 400 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 TNNT3P45378 269 aaPredicted RBP10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 CPT1AP50416 773 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 ZNF132P52740 706 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 LIN9Q5TKA1 542 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 APBB1IPQ7Z5R6 666 aaPredicted RBP10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 TMEM192Q8IY95 271 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 CCDC26Q8TAB7 109 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 SOCS4Q8WXH5 440 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 USP6NLQ92738 828 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 RNPC3Q96LT9 517 aaKnown RBP10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 HINFPQ9BQA5 517 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 ZSWIM1Q9BR11 485 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 AP1M1Q9BXS5 423 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 GCOM2Q9BZD3 368 aaPredicted RBP10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 MRPL47Q9HD33 250 aaKnown RBP10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 GDF3Q9NR23 364 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 CISHQ9NSE2 258 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 FLRT1Q9NZU1 646 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 Q9Y3F1 56 aa10.77□□□□□ -0.69
EFCAB11-209ENST00000556005 GOLGA6L10A0A0M3HER8 536 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SART1O43290 800 aaKnown RBP10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 GLI1P08151 1106 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SLC10A3P09131 477 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SMIM10L2AP0DMW4 78 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SMIM10L2BP0DMW5 78 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 MYBL2P10244 700 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 CD58P19256 250 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 CYP2B6P20813 491 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SLC1A1P43005 524 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 EPHB4P54760 987 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 NOMO3P69849 1222 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 MRPS25P82663 173 aaKnown RBP10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 GUCY2DQ02846 1103 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SREBF2Q12772 1141 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 PCBP1Q15365 356 aaKnown RBP eCLIP10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 DCAF12L1Q5VU92 463 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SCARA3Q6AZY7 606 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 EMBQ6PCB8 327 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 MON1BQ7L1V2 547 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 MAATS1Q7Z4T9 603 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 PHF13Q86YI8 300 aaPredicted RBP10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 CD302Q8IX05 232 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 AENQ8WTP8 325 aaKnown RBP10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 ACAP3Q96P50 834 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 UBXN6Q9BZV1 441 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 AP5M1Q9H0R1 490 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 XYLT2Q9H1B5 865 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SLITRK6Q9H5Y7 841 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 EPB41L5Q9HCM4 733 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 ADAM22Q9P0K1 906 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 ANAPC7Q9UJX3 599 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 SMIM35A0A1B0GVV1 85 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 MYO1FO00160 1098 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 TNPO2O14787 897 aaKnown RBP10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 RAD51CO43502 376 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 NFICP08651 508 aa10.76□□□□□ -0.69
EFCAB11-209ENST00000556005 WEE2P0C1S8 567 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms