RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 POLR2BP30876 1174 aaKnown RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 CYP2C18P33260 490 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 MLH1P40692 756 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 MYL6P60660 151 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 YWHAEP62258 255 aaKnown RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 GOLGA8FQ08AF8 430 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 GOLGA8DPQ0D2H9 430 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 GRIK3Q13003 919 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 MAPK8IP2Q13387 824 aaPredicted RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 CUL2Q13617 745 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 ASIC2Q16515 512 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 ZNF667Q5HYK9 610 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 E4F1Q66K89 784 aaPredicted RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 CNKSR3Q6P9H4 555 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 GJB7Q6PEY0 223 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 GLB1LQ6UWU2 654 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 RTN4RL1Q86UN2 441 aaPredicted RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 FAM71AQ8IYT1 594 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 TTC39CQ8N584 583 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 DBF4BQ8NFT6 615 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 LINC01599Q8WXQ3 324 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 FAM84AQ96KN4 292 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 ZNF560Q96MR9 790 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 KREMEN1Q96MU8 473 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 GAD1Q99259 594 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 PI4K2AQ9BTU6 479 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 GPR88Q9GZN0 384 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 APOBEC3GQ9HC16 384 aaKnown RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 TMEM161AQ9NX61 479 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 ANK1P16157 1881 aa8.21□□□□□ -1.09
TDP1-209ENST00000554180 PIRO00625 290 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 ENPP3O14638 875 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 EVI5O60447 810 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 KRT19P08727 400 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 RPL9P32969 192 aaKnown RBP8.21□□□□□ -1.1
TDP1-209ENST00000554180 CYLC1P35663 651 aaPredicted RBP8.21□□□□□ -1.1
TDP1-209ENST00000554180 ASPAP45381 313 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 CCL23P55773 120 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 KLHL30Q0D2K2 578 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 NAB2Q15742 525 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 TDRD12Q587J7 1177 aaKnown RBP8.21□□□□□ -1.1
TDP1-209ENST00000554180 GLRA4Q5JXX5 417 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 C9orf57Q5W0N0 161 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 HGSNATQ68CP4 663 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 MFSD5Q6N075 450 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 IRF2BP2Q7Z5L9 587 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 VPS36Q86VN1 386 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 TMEM199Q8N511 208 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 UBR7Q8N806 425 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 GSTCDQ8NEC7 633 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 KIAA1524Q8TCG1 905 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 LPPQ93052 612 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 TATDN2Q93075 761 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 SCLYQ96I15 445 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 HPDLQ96IR7 371 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 CCDC42Q96M95 316 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 ZFP42Q96MM3 310 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 UROC1Q96N76 676 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 BCO2Q9BYV7 579 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 CYP3A43Q9HB55 503 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 KCND1Q9NSA2 647 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 KLK14Q9P0G3 267 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 ARHGAP20Q9P2F6 1191 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 KANSL3Q9P2N6 904 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 TUBGCP4Q9UGJ1 667 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 AJAP1Q9UKB5 411 aaPredicted RBP8.21□□□□□ -1.1
TDP1-209ENST00000554180 AGAP1Q9UPQ3 857 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 CNTN6Q9UQ52 1028 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 NUB1Q9Y5A7 615 aa8.21□□□□□ -1.1
TDP1-209ENST00000554180 ABHD14A-ACY1A0A1B0GW23 586 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 TRIM43BA6NCK2 446 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 SOWAHDA6NJG2 315 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 MEIS3P2A8K0S8 358 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 FOXN3O00409 490 aaPredicted RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 CCP110O43303 1012 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 BAIAP3O94812 1187 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 CLSTN1O94985 981 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 NDUFA10O95299 355 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 IPO7O95373 1038 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 LCA5LO95447 670 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 FAM163BP0C2L3 166 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 RAG1P15918 1043 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 EN2P19622 333 aaPredicted RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 ACO1P21399 889 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 MSNP26038 577 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 TAF6P49848 677 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 SCNN1GP51170 649 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 BPIFB4P59827 614 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 TNNC1P63316 161 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 TUSC3Q13454 348 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 IKBKEQ14164 716 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 BMS1Q14692 1282 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 ARHGAP44Q17R89 818 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 WDR72Q3MJ13 1102 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 SV2CQ496J9 727 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 SPOPLQ6IQ16 392 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 ZNF677Q86XU0 584 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 NPAS4Q8IUM7 802 aa8.2□□□□□ -1.1
TDP1-209ENST00000554180 RPUSD2Q8IZ73 545 aaKnown RBP8.2□□□□□ -1.1
TDP1-209ENST00000554180 CRIPAKQ8N1N5 446 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms